RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ZMAT3Q9HA38 289 aaKnown RBP13.01□□□□□ -0.33
U2AF1-211ENST00000486519 BRF2Q9HAW0 419 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 MYEF2Q9P2K5 600 aaKnown RBP13.01□□□□□ -0.33
U2AF1-211ENST00000486519 VPS29Q9UBQ0 182 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 FLVCR1Q9Y5Y0 555 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 MDFIC2A0A1B0GVS7 189 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 ZNF503-AS2A6NEH8 195 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 OR6C65A6NJZ3 312 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 ETV2O00321 342 aaPredicted RBP13□□□□□ -0.33
U2AF1-211ENST00000486519 SCAMP2O15127 329 aaKnown RBP13□□□□□ -0.33
U2AF1-211ENST00000486519 LGI1O95970 557 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 DDCP20711 480 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 HTR6P50406 440 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 ZNF75DP51815 510 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 PRKAG1P54619 331 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 HSPB3Q12988 150 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 HEPACAMQ14CZ8 416 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 LRIG3Q6UXM1 1119 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 LINGO2Q7L985 606 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 BHLHE22Q8NFJ8 381 aaPredicted RBP13□□□□□ -0.33
U2AF1-211ENST00000486519 OR4F15Q8NGB8 312 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 SLC25A28Q96A46 364 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 ACPTQ9BZG2 426 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 REV1Q9UBZ9 1251 aa13□□□□□ -0.33
U2AF1-211ENST00000486519 IGHV2OR16-5A0A0B4J2B6 119 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 OR4F21O95013 312 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 IGHV2-5P01817 119 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 TIA1P31483 386 aaKnown RBP eCLIP12.99□□□□□ -0.33
U2AF1-211ENST00000486519 CDH13P55290 713 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 ARL4CP56559 192 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 C2orf80Q0P641 193 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 SLC9B1Q4ZJI4 515 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 SYT14P1Q58G82 188 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 KRT80Q6KB66 452 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 CCBE1Q6UXH8 406 aaPredicted RBP12.99□□□□□ -0.33
U2AF1-211ENST00000486519 LRP11Q86VZ4 500 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 OR1K1Q8NGR3 316 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 GRK7Q8WTQ7 553 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 SYT3Q9BQG1 590 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 OR11A1Q9GZK7 315 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 LZTFL1Q9NQ48 299 aa12.99□□□□□ -0.33
U2AF1-211ENST00000486519 A0A096LPE4 126 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 A0A1W2PPZ6 126 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 CCDC151A5D8V7 595 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 FAM159BA6NKW6 160 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 SLC22A31A6NKX4 558 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 E7ESA3 106 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 CLDN34H7C241 214 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 MANBAO00462 879 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 TIMM23O14925 209 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 CDC14BO60729 498 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 GPANK1O95872 356 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 PRPS2P11908 318 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 SUMO3P55854 103 aaPredicted RBP12.98□□□□□ -0.33
U2AF1-211ENST00000486519 TMEM33P57088 247 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 LCN2P80188 198 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 TGFBR3Q03167 851 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 BTKQ06187 659 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 HNRNPA0Q13151 305 aaKnown RBP12.98□□□□□ -0.33
U2AF1-211ENST00000486519 SNTB2Q13425 540 aaKnown RBP12.98□□□□□ -0.33
U2AF1-211ENST00000486519 FAM189A2Q15884 450 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 TECRLQ5HYJ1 363 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 EXOSC6Q5RKV6 272 aaKnown RBP12.98□□□□□ -0.33
U2AF1-211ENST00000486519 KPRPQ5T749 579 aaPredicted RBP12.98□□□□□ -0.33
U2AF1-211ENST00000486519 ZBED8Q8IZ13 594 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 DEFB108BQ8NET1 73 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 OR6Y1Q8NGX8 325 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 MRAPQ8TCY5 172 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 BCL2L2Q92843 193 aaPredicted RBP12.98□□□□□ -0.33
U2AF1-211ENST00000486519 BOD1Q96IK1 185 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 NUP50Q9UKX7 468 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 FZR1Q9UM11 496 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 TNPO3Q9Y5L0 923 aaKnown RBP12.98□□□□□ -0.33
U2AF1-211ENST00000486519 TENM3Q9P273 2699 aa12.98□□□□□ -0.33
U2AF1-211ENST00000486519 IGHV3OR16-10A0A075B7F0 116 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 GPR171O14626 319 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 SYNGR3O43761 229 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 SLITRK5O94991 958 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 ANPEPP15144 967 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 CCR4P51679 360 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 SESN3P58005 492 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 CSNK2A1P68400 391 aaPredicted RBP12.97□□□□□ -0.33
U2AF1-211ENST00000486519 OLFML2AQ68BL7 652 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 FAM71E1Q6IPT2 247 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 ANKRD26P1Q6NSI1 321 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 C16orf87Q6PH81 154 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 MTERF4Q7Z6M4 381 aaKnown RBP12.97□□□□□ -0.33
U2AF1-211ENST00000486519 WDFY1Q8IWB7 410 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 MMGT1Q8N4V1 131 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 TMCO5AQ8N6Q1 288 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 ZIC4Q8N9L1 334 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 OR5W2Q8NH69 310 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 PIGXQ8TBF5 258 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 CIDECQ96AQ7 238 aaPredicted RBP12.97□□□□□ -0.33
U2AF1-211ENST00000486519 ANKRD27Q96NW4 1050 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 HHATLQ9HCP6 504 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 TXNDC16Q9P2K2 825 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms