RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 DHCR7Q9UBM7 475 aaKnown RBP10.26□□□□□ -0.77
HDAC6-228ENST00000486227 NDRG4Q9ULP0 352 aaKnown RBP10.26□□□□□ -0.77
HDAC6-228ENST00000486227 CBLCQ9ULV8 474 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-228ENST00000486227 PPIL1Q9Y3C6 166 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 ATG2BQ96BY7 2078 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 CEACAM5P06731 702 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 CISD3P0C7P0 127 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 ICAM2P13598 275 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 DUSP7Q16829 419 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 PRAMEF17Q5VTA0 474 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 FAM205BPQ63HN1 556 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 MFSD4AQ8N468 514 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 FCAMRQ8WWV6 532 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 RSC1A1Q92681 617 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 EGLN3Q9H6Z9 239 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 TREM1Q9NP99 234 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 SLAMF7Q9NQ25 335 aa10.26□□□□□ -0.77
HDAC6-228ENST00000486227 TRAV27A0A087WT01 109 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 LRRTM2O43300 516 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 C1QBP02746 253 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 UBL4AP11441 157 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 RRADP55042 308 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 IHHQ14623 411 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SEC23BQ15437 767 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SGCAQ16586 387 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 NKAIN2Q5VXU1 208 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ELMOD3Q96FG2 381 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 FYTTD1Q96QD9 318 aaKnown RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 OR2M2Q96R28 347 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 CDC6Q99741 560 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 WDR77Q9BQA1 342 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ICKQ9UPZ9 632 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 PLXNB2O15031 1838 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 A0A1W2PR48 441 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 GYPBP06028 91 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ARSBP15848 533 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ASAH1Q13510 395 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 MANEAQ5SRI9 462 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 QSOX2Q6ZRP7 698 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 RFPL4BQ6ZWI9 263 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF595Q8IYB9 648 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SDR9C7Q8NEX9 313 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 OR6T1Q8NGN1 323 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 CLCC1Q96S66 551 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 DHRS9Q9BPW9 319 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 THAP7Q9BT49 309 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 C1GALT1Q9NS00 363 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 PADI1Q9ULC6 663 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 VDAC3Q9Y277 283 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 LOC105369274A0A096LPK9 316 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 CXorf51AA0A1B0GTR3 108 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 H3BML4 177 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 HMGB3O15347 200 aaKnown RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SIGLEC6O43699 453 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ZFAND5O76080 213 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF91Q05481 1191 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 C14orf28Q4W4Y0 310 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ALG10Q5BKT4 473 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 HACD4Q5VWC8 232 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ULK3Q6PHR2 472 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 UNQ6126/PRO20091Q6UXV3 157 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF227Q86WZ6 799 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 OR4N4Q8N0Y3 316 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SNIP1Q8TAD8 396 aaKnown RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF436Q9C0F3 470 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 GABARAPL1Q9H0R8 117 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SEMA6CQ9H3T2 930 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 TMEM185BQ9H7F4 350 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 DDX31Q9H8H2 851 aaKnown RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 EMC3Q9P0I2 261 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SERGEFQ9UGK8 458 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 MED16Q9Y2X0 877 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 IGLV3-16A0A075B6K0 115 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 HPGDSO60760 199 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 PRAF2O60831 178 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 H2BFMP0C1H6 154 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 TCN2P20062 427 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 HLA-DMAP28067 261 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SRYQ05066 204 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SIGIRRQ6IA17 410 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 OR5M11Q96RB7 305 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 NIPSNAP1Q9BPW8 284 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 PLA2G2FQ9BZM2 168 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SLIRPQ9GZT3 109 aaKnown RBP10.25□□□□□ -0.77
HDAC6-228ENST00000486227 SPNS1Q9H2V7 528 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 TRPV4Q9HBA0 871 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 PLCXD1Q9NUJ7 323 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 KCND3Q9UK17 655 aa10.25□□□□□ -0.77
HDAC6-228ENST00000486227 TRIOBPQ9H2D6 2365 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 BLACEA4D250 179 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 OR3A2P47893 321 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 CCR5P51681 352 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ACTA2P62736 377 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ERVK-25P63136 954 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ACTG2P63267 376 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 DLX2Q07687 328 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 OR5M10Q6IEU7 315 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 EIF5AL1Q6IS14 154 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 OPN5Q6U736 354 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms