RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 BLOC1S3Q6QNY0 202 aa15.7■□□□□ 0.1
COL6A1-204ENST00000486023 TFAP2EQ6VUC0 442 aa15.7■□□□□ 0.1
COL6A1-204ENST00000486023 ZNF100Q8IYN0 542 aa15.7■□□□□ 0.1
COL6A1-204ENST00000486023 ZHX1-C8orf76Q96EF9 292 aa15.7■□□□□ 0.1
COL6A1-204ENST00000486023 PSD2Q9BQI7 771 aa15.7■□□□□ 0.1
COL6A1-204ENST00000486023 NPHS2Q9NP85 383 aa15.7■□□□□ 0.1
COL6A1-204ENST00000486023 ZNF443Q9Y2A4 671 aaPredicted RBP15.7■□□□□ 0.1
COL6A1-204ENST00000486023 HIVEP1P15822 2718 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 A0A096LPI6 279 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 TMEM72A0PK05 275 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 CYTIPO60759 359 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 GOSR1O95249 250 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 THBDP07204 575 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 IL32P24001 234 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 CXCR1P25024 350 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 SLC1A3P43003 542 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 HTR3AP46098 478 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 PCYT1AP49585 367 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 POLR2HP52434 150 aaKnown RBP15.69■□□□□ 0.1
COL6A1-204ENST00000486023 CAPRIN1Q14444 709 aaKnown RBP15.69■□□□□ 0.1
COL6A1-204ENST00000486023 LARS2Q15031 903 aaKnown RBP15.69■□□□□ 0.1
COL6A1-204ENST00000486023 AP1ARQ63HQ0 302 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 SPNS3Q6ZMD2 512 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 MTDHQ86UE4 582 aaKnown RBP15.69■□□□□ 0.1
COL6A1-204ENST00000486023 CLIP4Q8N3C7 705 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 DDIT4LQ96D03 193 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 HS3ST6Q96QI5 342 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 RAD21L1Q9H4I0 556 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.69■□□□□ 0.1
COL6A1-204ENST00000486023 PRSS50Q9UI38 385 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 OSGIN1Q9UJX0 560 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 GPR52Q9Y2T5 361 aa15.69■□□□□ 0.1
COL6A1-204ENST00000486023 A0A0G2JND7 137 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 A0A0G2JPF8 293 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 HNRNPCL2B2RXH8 293 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 HNRNPCL3B7ZW38 293 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 HNRNPCL1O60812 293 aaKnown RBP15.68■□□□□ 0.1
COL6A1-204ENST00000486023 ATE1O95260 518 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 IGHV3-9P01782 118 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 HNRNPCL4P0DMR1 293 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 PRG2P13727 222 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 RPS4Y1P22090 263 aaKnown RBP15.68■□□□□ 0.1
COL6A1-204ENST00000486023 MAGEA8P43361 318 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 COPZ1P61923 177 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 EPS8Q12929 822 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 SQLEQ14534 574 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 ZNF311Q5JNZ3 666 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 GALNT5Q7Z7M9 940 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 CCDC103Q8IW40 242 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 UBE2J2Q8N2K1 259 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 S100PBPQ96BU1 408 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 FOXC2Q99958 501 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 THUMPD1Q9NXG2 353 aaKnown RBP15.68■□□□□ 0.1
COL6A1-204ENST00000486023 SLC25A37Q9NYZ2 338 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 TMEM181Q9P2C4 612 aa15.68■□□□□ 0.1
COL6A1-204ENST00000486023 ING1Q9UK53 422 aaPredicted RBP15.68■□□□□ 0.1
COL6A1-204ENST00000486023 CDHR4A6H8M9 788 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 FRS3O43559 492 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 PPP3CBP16298 524 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 EDNRAP25101 427 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 HOXC5Q00444 222 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 BNIP2Q12982 314 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 DEFB113Q30KQ7 82 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 SFRP5Q5T4F7 317 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 GCNT6Q5T4J0 391 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 MSRB3Q8IXL7 192 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 ZNF440Q8IYI8 595 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 STEAP2Q8NFT2 490 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 NFKBIDQ8NI38 313 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 PMM1Q92871 262 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 TACO1Q9BSH4 297 aaKnown RBP15.67■□□□□ 0.1
COL6A1-204ENST00000486023 ARMC7Q9H6L4 198 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 BCO1Q9HAY6 547 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 GP6Q9HCN6 339 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 HDGFL3Q9Y3E1 203 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 ABCA4P78363 2273 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 HEATR5AQ86XA9 2040 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 F8P00451 2351 aa15.67■□□□□ 0.1
COL6A1-204ENST00000486023 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.66■□□□□ 0.1
COL6A1-204ENST00000486023 ZC3H12DA2A288 527 aaKnown RBP15.66■□□□□ 0.1
COL6A1-204ENST00000486023 ZNF814B7Z6K7 855 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 RAMP1O60894 148 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 GCM2O75603 506 aaPredicted RBP15.66■□□□□ 0.1
COL6A1-204ENST00000486023 LYZL6O75951 148 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 PMS2P2O95744 297 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 FPR1P21462 350 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 FKBP2P26885 142 aaKnown RBP15.66■□□□□ 0.1
COL6A1-204ENST00000486023 OR3A2P47893 321 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 FADDQ13158 208 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 STK11Q15831 433 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 SERPINA11Q86U17 422 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 GABRG1Q8N1C3 465 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 KISS1RQ969F8 398 aaPredicted RBP15.66■□□□□ 0.1
COL6A1-204ENST00000486023 PLPPR2Q96GM1 343 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 HDHD5Q9BXW7 423 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 A4GALTQ9NPC4 353 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 EMC3Q9P0I2 261 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 VAPAQ9P0L0 249 aa15.66■□□□□ 0.1
COL6A1-204ENST00000486023 NOSIPQ9Y314 301 aaKnown RBP15.66■□□□□ 0.1
COL6A1-204ENST00000486023 IFT52Q9Y366 437 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms