RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 WDYHV1Q96HA8 205 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 MPP4Q96JB8 637 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 KLHL15Q96M94 604 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 NSMCE2Q96MF7 247 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 MCHR1Q99705 422 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 TACO1Q9BSH4 297 aaKnown RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 NAA11Q9BSU3 229 aaPredicted RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 THTPAQ9BU02 230 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 POTEKPQ9BYX7 375 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ADAM19Q9H013 955 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 FANCFQ9NPI8 374 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 TAS2R1Q9NYW7 299 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 SPRR3Q9UBC9 169 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 TRAPPC4Q9Y296 219 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 SH3GLB1Q9Y371 365 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 TMED7Q9Y3B3 224 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ZNF175Q9Y473 711 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 SNX13Q9Y5W8 968 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 LIPGQ9Y5X9 500 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 FREM3P0C091 2139 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ITPR3Q14573 2671 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CENPVL1A0A0U1RR11 272 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 SLC22A20A6NK97 555 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 OIP5O43482 229 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 EIF1BO60739 113 aaKnown RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 DNAJC8O75937 253 aaPredicted RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 NTN1O95631 604 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 PLGP00747 810 aaPredicted RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 SERPINA1P01009 418 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CRHP06850 196 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 GKN3PP0CG01 181 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 T-ENOLP0DO92 83 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 THRBP10828 461 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TCN1P20061 433 aaPredicted RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 GTF2E2P29084 291 aaKnown RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TACR3P29371 465 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 SFTPDP35247 375 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 OPRM1P35372 400 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TIMP3P35625 211 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CPOXP36551 454 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 ACAA2P42765 397 aaKnown RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 EIF1AXP47813 144 aaKnown RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 STARP49675 285 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CLDN15P56746 228 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CLDN18P56856 261 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 RIPPLY3P57055 190 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TAS2R41P59536 307 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 RAC3P60763 192 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 SLC35A1P78382 337 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 PMPCAQ10713 525 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TRAP1Q12931 704 aaKnown RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 BNIP1Q12981 228 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TRIM25Q14258 630 aaKnown RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 RNPS1Q15287 305 aaKnown RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 DUSP7Q16829 419 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 ACSF3Q4G176 576 aaPredicted RBP7.45□□□□□ -1.22
SF3A1-208ENST00000485618 IFI44LQ53G44 452 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 SYT14P1Q58G82 188 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 ALG10BQ5I7T1 473 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 C1QL3Q5VWW1 255 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 POMZP3Q6PJE2 187 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CBLL1Q75N03 491 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 RRM2BQ7LG56 351 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 FJX1Q86VR8 437 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CARM1Q86X55 608 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 C10orf111Q8N326 155 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 OR5M1Q8NGP8 315 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 STK35Q8TDR2 534 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 OR5B2Q96R09 309 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TRIB1Q96RU8 372 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 ARHGDIGQ99819 225 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TAPBPLQ9BX59 468 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 CD300AQ9UGN4 299 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 EGFL7Q9UHF1 273 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 SH3BGRL2Q9UJC5 107 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 TINAGQ9UJW2 476 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 NOTCH2Q04721 2471 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 MYO7BQ6PIF6 2116 aa7.45□□□□□ -1.22
SF3A1-208ENST00000485618 DIDO1Q9BTC0 2240 aaKnown RBP7.44□□□□□ -1.22
SF3A1-208ENST00000485618 C2CD3Q4AC94 2353 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 TRAPPC13A5PLN9 417 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 WIPF3A6NGB9 483 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 CLCA1A8K7I4 914 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 SULT2B1O00204 365 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 DVL2O14641 736 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 TPST1O60507 370 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 OR5F1O95221 314 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 AHSA1O95433 338 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 OPN1SWP03999 348 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 HIST1H2ABP04908 130 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 GPIP06744 558 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 CCNA2P20248 432 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 ENPP1P22413 925 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 PSMA4P25789 261 aaKnown RBP7.44□□□□□ -1.22
SF3A1-208ENST00000485618 CHRNB4P30926 498 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 IDUAP35475 653 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 CTBP2P56545 445 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 NUP107P57740 925 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 ST3GAL3Q11203 375 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms