RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 OR5K1Q8NHB7 308 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 WDR36Q8NI36 951 aaKnown RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 NUBPLQ8TB37 319 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 STT3BQ8TCJ2 826 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 GPR151Q8TDV0 419 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 PHF10Q8WUB8 498 aaKnown RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 LRTOMTQ8WZ04 291 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 MAL2Q969L2 176 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 SLCO4A1Q96BD0 722 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 TAMM41Q96BW9 452 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 HSPBAP1Q96EW2 488 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 GIMAP5Q96F15 307 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 VMP1Q96GC9 406 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 TPD52L3Q96J77 140 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 ZNF597Q96LX8 424 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 VSTM2LQ96N03 204 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 COL21A1Q96P44 957 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 IP6K3Q96PC2 410 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 ZNF300Q96RE9 604 aaPredicted RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 SEPHS2Q99611 448 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 LPAR4Q99677 370 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 PKP2Q99959 881 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 TEX12Q9BXU0 123 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 ULBP3Q9BZM4 244 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 VN1R1Q9GZP7 353 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 EXOSC3Q9NQT5 275 aaKnown RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 FSCN3Q9NQT6 498 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 STARD5Q9NSY2 213 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 SLC39A1Q9NY26 324 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 SMPD3Q9NY59 655 aaPredicted RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 ETAA1Q9NY74 926 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 TMEM9Q9P0T7 183 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 KIF17Q9P2E2 1029 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 NKX1-2Q9UD57 310 aaPredicted RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 TUBD1Q9UJT1 453 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 KCND3Q9UK17 655 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 TMCC3Q9ULS5 477 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 ABCG2Q9UNQ0 655 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 ERVK-11Q9UQG0 969 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 SLC35A3Q9Y2D2 325 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 MRPS2Q9Y399 296 aaKnown RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 SAMHD1Q9Y3Z3 626 aaKnown RBP3.94□□□□□ -1.78
SPTA1-206ENST00000484520 OR10H1Q9Y4A9 318 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 LOXL2Q9Y4K0 774 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 PCDHGB6Q9Y5F9 930 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 ENPP4Q9Y6X5 453 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 HSPE1-MOB4S4R3N1 261 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 BAHCC1Q9P281 2608 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 LAMA1P25391 3075 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 MYO15AQ9UKN7 3530 aa3.94□□□□□ -1.78
SPTA1-206ENST00000484520 CFAP54Q96N23 3096 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 PCDH15Q96QU1 1955 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 RIF1Q5UIP0 2472 aaKnown RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 LOC102723996A0A087X1L8 192 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 SAGE2PA6NJ88 616 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 C4orf47A7E2U8 309 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 IDSB3KWA1 339 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 FAM227AF5H4B4 570 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 TNFRSF11BO00300 401 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 AP3D1O14617 1153 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 SLC30A4O14863 429 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 DENRO43583 198 aaKnown RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 HCRTR1O43613 425 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 TPST1O60507 370 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 ALOX12BO75342 701 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 CSO75390 466 aaKnown RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 JRKO75564 520 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 TIPRLO75663 272 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 CDC123O75794 336 aaPredicted RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 ZFAND5O76080 213 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 OR5F1O95221 314 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 H6PDO95479 791 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 IL33O95760 270 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 LGI1O95970 557 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 MT-CO3P00414 261 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 ADAP00813 363 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 IGKV3-11P04433 115 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 H1F0P07305 194 aaKnown RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 FESP07332 822 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 CHRM4P08173 479 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 PABPC4LP0CB38 370 aaKnown RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 CEACAM1P13688 526 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 HPGDP15428 266 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 IL7RP16871 459 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 EFNA1P20827 205 aaPredicted RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 GSTM3P21266 225 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 MAOAP21397 527 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 IL12BP29460 328 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 AQP1P29972 269 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 SLC5A2P31639 672 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 GABRA3P34903 492 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 PIGAP37287 484 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 OR1D4P47884 311 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 SLC6A8P48029 635 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 EMDP50402 254 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 PGDP52209 483 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 EMP2P54851 167 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 SLC37A1P57057 533 aa3.93□□□□□ -1.78
SPTA1-206ENST00000484520 RPS15P62841 145 aaKnown RBP3.93□□□□□ -1.78
SPTA1-206ENST00000484520 CSNK2BP67870 215 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms