RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CHMP24386 653 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SSTR4P31391 388 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 FMO3P31513 532 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 RFC3P40938 356 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 GSSP48637 474 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 EMDP50402 254 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 TNFSF10P50591 281 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 DCAF7P61962 342 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 EEF1A1P68104 462 aaKnown RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 PSG6Q00889 435 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 MVKQ03426 396 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 PTGES3Q15185 160 aaKnown RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SEC23BQ15437 767 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ELAVL1Q15717 326 aaKnown RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 NPTX1Q15818 432 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 NEDD8Q15843 81 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 DECR1Q16698 335 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ACER2Q5QJU3 275 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 MRPL2Q5T653 305 aaKnown RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ABHD17BQ5VST6 288 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 FOXB2Q5VYV0 432 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 HLA-DQA1Q5Y7H0 255 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 C1orf94Q6P1W5 598 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 TUBA3EQ6PEY2 450 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 IGFL3Q6UXB1 125 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 CD300LDQ6UXZ3 194 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 B3GNT6Q6ZMB0 384 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 PTCHD4Q6ZW05 846 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF550Q7Z398 422 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ATCAYQ86WG3 371 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 CLVS1Q8IUQ0 354 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 CMIPQ8IY22 773 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ENTHD1Q8IYW4 607 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ALDH16A1Q8IZ83 802 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 CDK20Q8IZL9 346 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SPARTQ8N0X7 666 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 CLIP4Q8N3C7 705 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF527Q8NB42 609 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 APCDD1LQ8NCL9 501 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SIMC1Q8NDZ2 872 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 OR14A16Q8NHC5 309 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 C16orf52Q8NHV5 167 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF420Q8TAQ5 688 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 TEX47Q8TBZ9 253 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 RNF217Q8TC41 542 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 GRHL3Q8TE85 626 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ACOT11Q8WXI4 607 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SLC35B4Q969S0 331 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SLC41A3Q96GZ6 507 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 VSTM2LQ96N03 204 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF559Q9BR84 538 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 HOXD1Q9GZZ0 328 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 CTPS2Q9NRF8 586 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 COPS7AQ9UBW8 275 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 CBLCQ9ULV8 474 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 RNF6Q9Y252 685 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 FLNBO75369 2602 aaKnown RBP6.33□□□□□ -1.4
BRCA1-216ENST00000484087 A0A0G2JMM0 328 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 A0A1W2PPB8 328 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 A0A1W2PRS3 328 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 CDHR4A6H8M9 788 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 OR5H15A6NDH6 313 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 VGLL3A8MV65 326 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 KIR3DP1A8MWS1 328 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 E9PQ18 207 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 G3V3Y1 287 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 WWP2O00308 870 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 XPNPEP2O43895 674 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 OR6B1O95007 311 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 IL2RAP01589 272 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 MST1P26927 711 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 EPHA2P29317 976 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 GSTT1P30711 240 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SOX18P35713 384 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SMSP52788 366 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 ATP12AP54707 1039 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 GPR85P60893 370 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 PSPHP78330 225 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SLC35A2P78381 396 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 HSF1Q00613 529 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 OC90Q02509 493 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-216ENST00000484087 TSPAN31Q12999 210 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 RAB39AQ14964 217 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 C11orf91Q3C1V1 193 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 AP1ARQ63HQ0 302 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF613Q6PF04 617 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 Q6ZPB1 254 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-216ENST00000484087 MBOAT2Q6ZWT7 520 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 SLC29A4Q7RTT9 530 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 PRSS48Q7RTY5 328 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 GDF7Q7Z4P5 450 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 ZER1Q7Z7L7 766 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 COMTD1Q86VU5 262 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF227Q86WZ6 799 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 GRAMD2AQ8IUY3 354 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF440Q8IYI8 595 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 RNF113BQ8IZP6 322 aaKnown RBP6.33□□□□□ -1.4
BRCA1-216ENST00000484087 CYP4Z2PQ8N1L4 340 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 STX19Q8N4C7 294 aa6.33□□□□□ -1.4
BRCA1-216ENST00000484087 RHOXF1Q8NHV9 184 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms