RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 STYXL1Q9Y6J8 313 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 PPIAL4CA0A0B4J2A2 164 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PRR23D1E9PI22 279 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 G3V4G9 280 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 GPAA1O43292 621 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TSPAN2O60636 221 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 HCN1O60741 890 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TRIM3O75382 744 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 PNMA6AP0CW24 399 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 PRR23D2P0DMB1 279 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 PPIAL4GP0DN37 164 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 NEFHP12036 1026 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 GP9P14770 177 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 KITLGP21583 273 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 RBMS1P29558 406 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 UBE2MP61081 183 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 DGCR2P98153 550 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TRAP1Q12931 704 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 RHBDD2Q6NTF9 364 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 KCTD18Q6PI47 426 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 Q6ZNX1 250 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 AMIGO2Q86SJ2 522 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 RBM45Q8IUH3 476 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 CCDC65Q8IXS2 484 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 OR14A16Q8NHC5 309 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PNPLA2Q96AD5 504 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 RAB11FIP5Q9BXF6 653 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 OR51M1Q9H341 326 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 SLC17A5Q9NRA2 495 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 RNF146Q9NTX7 359 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PSMC3IPQ9P2W1 217 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 STOML2Q9UJZ1 356 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PRPF19Q9UMS4 504 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 TCAF1Q9Y4C2 921 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TRIOO75962 3097 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TRPC5OSA6NMA1 111 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 CLDN5O00501 218 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 OR7A17O14581 309 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 SNAI2O43623 268 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 WDR1O75083 606 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 LCA5LO95447 670 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 IGHG3P01860 377 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 P04436 131 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 HIST1H2AGP0C0S8 130 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 UBTFL1P0CB47 393 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 GSTT2P0CG29 244 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 GSTT2BP0CG30 244 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 NDUFB7P17568 137 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TBXA2RP21731 343 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PPP1R2P41236 205 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 ACADSBP45954 432 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 CLDN17P56750 224 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 MAP3K7CLP57077 242 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 LRRC63Q05C16 580 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 SGSM1Q2NKQ1 1148 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TP53I3Q53FA7 332 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 DMKNQ6E0U4 476 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 TMEM225Q6GV28 225 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PPP1R2P3Q6NXS1 205 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 CENPUQ71F23 418 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 SATL1Q86VE3 508 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 CCDC197Q8NCU1 140 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 LRRC15Q8TF66 581 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 HIST1H2ACQ93077 130 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 ABTB1Q969K4 478 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 TRNT1Q96Q11 434 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 KXD1Q9BQD3 176 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 DPH7Q9BTV6 452 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 NSRP1Q9H0G5 558 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 LZTFL1Q9NQ48 299 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 GPR83Q9NYM4 423 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 STUB1Q9UNE7 303 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 DMXL2Q8TDJ6 3036 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 ASH1LQ9NR48 2969 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 PPIAL4EA0A075B759 164 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 hDV102S1A0JD36 115 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 M0QXV9 152 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 DFFBO76075 338 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 RETP07949 1114 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PPIAL4FP0DN26 164 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 MSH3P20585 1137 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 SLC1A2P43004 574 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 TNNC1P63316 161 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PON2Q15165 354 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 C18orf21Q32NC0 220 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 SNRNP48Q6IEG0 339 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 TRMT10CQ7L0Y3 403 aaKnown RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 BHLHA15Q7RTS1 189 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 ARHGEF19Q8IW93 802 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 DDHD1Q8NEL9 900 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 OR6X1Q8NH79 312 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 NUBPLQ8TB37 319 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 GIPC3Q8TF64 312 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 C20orf24Q9BUV8 137 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 GLIPR2Q9H4G4 154 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 FNDC4Q9H6D8 234 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 PLEK2Q9NYT0 353 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 SLC17A7Q9P2U7 560 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms