RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ARFGAP2Q8N6H7 521 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 FAM71CQ8NEG0 241 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF75CPQ92670 426 aaPredicted RBP13.48□□□□□ -0.25
LIMS3-203ENST00000480744 ZG16BQ96DA0 208 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 CCDC106Q9BWC9 280 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 OR11A1Q9GZK7 315 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 SAP130Q9H0E3 1048 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.48□□□□□ -0.25
LIMS3-203ENST00000480744 LIPT1Q9Y234 373 aa13.48□□□□□ -0.25
LIMS3-203ENST00000480744 NOSIPQ9Y314 301 aaKnown RBP13.48□□□□□ -0.25
LIMS3-203ENST00000480744 MAGED1Q9Y5V3 778 aaPredicted RBP13.48□□□□□ -0.25
LIMS3-203ENST00000480744 CIB4A0PJX0 185 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 RAMP1O60894 148 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 RAD51DO75771 328 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 C1QCP02747 245 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 COX5AP20674 150 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 IDH2P48735 452 aaKnown RBP13.47□□□□□ -0.25
LIMS3-203ENST00000480744 CDH11P55287 796 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 OR2B6P58173 313 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 UFM1P61960 85 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 KCNJ10P78508 379 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 LSRQ86X29 649 aaPredicted RBP13.47□□□□□ -0.25
LIMS3-203ENST00000480744 ANKFN1Q8N957 763 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 ANKRD42Q8N9B4 389 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 MAPK1IP1LQ8NDC0 245 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 OIT3Q8WWZ8 545 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 CNOT9Q92600 299 aaKnown RBP13.47□□□□□ -0.25
LIMS3-203ENST00000480744 APH1AQ96BI3 265 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 ARL5BQ96KC2 179 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 CCDC115Q96NT0 180 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 PANX1Q96RD7 426 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 TRIM2Q9C040 744 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 ALG2Q9H553 416 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 MEAF6Q9HAF1 191 aa13.47□□□□□ -0.25
LIMS3-203ENST00000480744 CHD3Q12873 2000 aaKnown RBP13.47□□□□□ -0.25
LIMS3-203ENST00000480744 PRAMEF27A3QJZ7 478 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 CCDC154A6NI56 674 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 CCT8L1PA6NM43 557 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 RNF223E7ERA6 249 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 OVOL3O00110 214 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 HMGN4O00479 90 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 AP3D1O14617 1153 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 ABCD4O14678 606 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 PMS2P2O95744 297 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 GUSBP08236 651 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 ALDOCP09972 364 aaKnown RBP13.46□□□□□ -0.25
LIMS3-203ENST00000480744 IDUAP35475 653 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 MAGOHP61326 146 aaKnown RBP13.46□□□□□ -0.25
LIMS3-203ENST00000480744 BST1Q10588 318 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 SYPL1Q16563 259 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 TIMM23BQ5SRD1 257 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 HHATQ5VTY9 493 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 FBXW9Q5XUX1 488 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF621Q6ZSS3 439 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 CROCCP2Q86T23 111 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 PRIMA1Q86XR5 153 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 ADGRG3Q86Y34 549 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 TRIML2Q8N7C3 387 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF433Q8N7K0 673 aaPredicted RBP13.46□□□□□ -0.25
LIMS3-203ENST00000480744 OR52N5Q8NH56 324 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 PIGXQ8TBF5 258 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 PNPT1Q8TCS8 783 aaKnown RBP13.46□□□□□ -0.25
LIMS3-203ENST00000480744 TEX37Q96LM6 180 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 OR52E6Q96RD3 313 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 INPP5KQ9BT40 448 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 EXOSC3Q9NQT5 275 aaKnown RBP13.46□□□□□ -0.25
LIMS3-203ENST00000480744 AIG1Q9NVV5 245 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 CISD1Q9NZ45 108 aaKnown RBP13.46□□□□□ -0.25
LIMS3-203ENST00000480744 NPAP1Q9NZP6 1156 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 BTNL2Q9UIR0 455 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 HAO1Q9UJM8 370 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 HDGFL3Q9Y3E1 203 aa13.46□□□□□ -0.25
LIMS3-203ENST00000480744 PLCE1Q9P212 2302 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 IGKV3D-15A0A087WSY6 115 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 TMED7-TICAM2A0A0A6YYA0 188 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 GOLGA8QA0A0J9YX86 632 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 A0A1W2PR80 420 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 TMEM120BA0PK00 339 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 GOLGA8OA6NCC3 632 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 OR5H1A6NKK0 313 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 ZNF716A6NP11 495 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 GOLGA8NF8WBI6 632 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 SDHDO14521 159 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 GPR171O14626 319 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 ADAM11O75078 769 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 SASH3O75995 380 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 GSNP06396 782 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 CHRM4P08173 479 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 PTNP21246 168 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 ACVR1BP36896 505 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 CDKN2CP42773 168 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 ANXA11P50995 505 aaKnown RBP13.45□□□□□ -0.26
LIMS3-203ENST00000480744 ZNF83P51522 516 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 WDR4P57081 412 aaKnown RBP13.45□□□□□ -0.26
LIMS3-203ENST00000480744 PLAURQ03405 335 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 PDK3Q15120 406 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 ETFDHQ16134 617 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 PGGHGQ32M88 737 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 TTMPQ5BVD1 217 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 OGFOD2Q6N063 350 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms