RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CT45A9P0DMV2 189 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CT45A2Q5DJT8 189 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CT45A1Q5HYN5 189 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 MMP21Q8N119 569 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CT45A3Q8NHU0 189 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 LHPPQ9H008 270 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 PLEK2Q9NYT0 353 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CNIH4Q9P003 139 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ETV7Q9Y603 341 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 V9GY05 133 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CRYBG1Q9Y4K1 1723 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 HLA-HP01893 362 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 NAA40Q86UY6 237 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SLC35F3Q8IY50 421 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 GLIS1Q8NBF1 620 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SYNPRQ8TBG9 265 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 MED30Q96HR3 178 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 KCNJ15Q99712 375 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 XYLT2Q9H1B5 865 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SLC43A1O75387 559 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 IL1AP01583 271 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 HEXAP06865 529 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 EIF1P41567 113 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 RPL22L1Q6P5R6 122 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 RNF113BQ8IZP6 322 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 OR56B1Q8NGI3 324 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CLSTN3Q9BQT9 956 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SLCO5A1Q9H2Y9 848 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 C4AP0C0L4 1744 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 C4BP0C0L5 1744 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ANTXRLA6NF34 631 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 GMPRP36959 345 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SLC10A1Q14973 349 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 TMEM71Q6P5X7 295 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CNEP1R1Q8N9A8 125 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ZMYND19Q96E35 227 aaPredicted RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 IGSF5Q9NSI5 407 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 NXT1Q9UKK6 140 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 HOXD13P35453 343 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 LYSMD4Q5XG99 296 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 B3GLCTQ6Y288 498 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 GRAMD2AQ8IUY3 354 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 GCNT2Q8N0V5 402 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CBLCQ9ULV8 474 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 LRRC30A6NM36 301 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 H3BML4 177 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 K7EPK0 472 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 PRKAR1BP31321 381 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 NPBWR1P48145 328 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 GAREM2Q75VX8 874 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 GPR155Q7Z3F1 870 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 FAM71E2Q8N5Q1 922 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 LFNGQ8NES3 379 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 OR52B6Q8NGF0 335 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 EHFQ9NZC4 300 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 TMEM181Q9P2C4 612 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 LRP6O75581 1613 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 DCDC2BA2VCK2 349 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 LRP5LA4QPB2 252 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 NPIPA7E9PJI5 369 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ADAM23O75077 832 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 NPIPA8P0DM63 369 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 TNFRSF4P43489 277 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 EEF1A1P68104 462 aaKnown RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 TLE4Q04727 773 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 SLC14A1Q13336 389 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 USP53Q70EK8 1073 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 IL17FQ96PD4 163 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 LIN7BQ9HAP6 207 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CD300AQ9UGN4 299 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 OR7A17O14581 309 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CA5AP35218 305 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF684Q5T5D7 378 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF300Q96RE9 604 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CCNL2Q96S94 520 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ACSS1Q9NUB1 689 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CA14Q9ULX7 337 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 PTGER4P35408 488 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 BMPR1AP36894 532 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 SLC36A2Q495M3 483 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 C3orf38Q5JPI3 329 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 SFRP5Q5T4F7 317 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 VN1R3Q9BXE9 311 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ADAMTS6Q9UKP5 1117 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 EMC9Q9Y3B6 208 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 SNAI1O95863 264 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 TIMP2P16035 220 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 SIM1P81133 766 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CDK5R2Q13319 367 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CRTC1Q6UUV9 634 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CNTN4Q8IWV2 1026 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 PBX4Q9BYU1 374 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 DPH1Q9BZG8 443 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF443Q9Y2A4 671 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 HIDE1A8MVS5 230 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 RBMS2Q15434 407 aaKnown RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 SSX2Q16385 188 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF595Q8IYB9 648 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 DNAJC15Q9Y5T4 150 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 WIF1Q9Y5W5 379 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms