RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ZNF43P17038 809 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 PRDX3P30048 256 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 EVI2BP34910 448 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 AQP2P41181 271 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 LTBQ06643 244 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 OPN5Q6U736 354 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 DPY19L2P2Q6ZN68 376 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 TMPPEQ6ZT21 453 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 ZFP41Q8N8Y5 198 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 NMNAT2Q9BZQ4 307 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 RPS10P5Q9NQ39 176 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 VAMP5O95183 116 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 SYNGR4O95473 234 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 PLGP00747 810 aaPredicted RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 XCR1P46094 333 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GP2P55259 537 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 TGFBR3Q03167 851 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 SNTB1Q13884 538 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 IHHQ14623 411 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 LRIT3Q3SXY7 679 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 FCRL6Q6DN72 434 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 PAPD4Q6PIY7 484 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 ACOT7LQ6ZUV0 252 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 FRMD1Q8N878 549 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 ZNF680Q8NEM1 530 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 SLC30A7Q8NEW0 376 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GLYATL2Q8WU03 294 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GHSRQ92847 366 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 TAAR8Q969N4 342 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 NEIL2Q969S2 332 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 EGLN2Q96KS0 407 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 OR52A5Q9H2C5 316 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 UBQLN3Q9H347 655 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 C1orf123Q9NWV4 160 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GDE1Q9NZC3 331 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 RAB22AQ9UL26 194 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 CSNK1G3Q9Y6M4 447 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 PTPRZ1P23471 2315 aaPredicted RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 TRIM64A6NGJ6 449 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 OR6C65A6NJZ3 312 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 TMEM88BA6NKF7 163 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 ZAR1LA6NP61 321 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GRXCR1A8MXD5 290 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 RTCAO00442 366 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GFRA2O00451 464 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GJB5O95377 273 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 AKR1C4P17516 323 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 TACR1P25103 407 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 PTPN6P29350 595 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 LSSP48449 732 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 DGKEP52429 567 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 MCCD1P59942 119 aaPredicted RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 HTR4Q13639 388 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 SMN1Q16637 294 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 FAM71E1Q6IPT2 247 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GDF6Q6KF10 455 aaPredicted RBP5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 STEAP1BQ6NZ63 245 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 LIPIQ6XZB0 460 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 SSX9Q7RTT3 188 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 GPRIN1Q7Z2K8 1008 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 UEVLDQ8IX04 471 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 RLIMQ9NVW2 624 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 FBXL3Q9UKT7 428 aa5.75□□□□□ -1.49
PRPF4B-205ENST00000480058 KIR2DS1A0A191URI9 304 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 CD300LBA8K4G0 201 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 TARM1B6A8C7 271 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 MAN2B1O00754 1011 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 AQP8O94778 261 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 ZDHHC11BP0C7U3 371 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 CST5P28325 142 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 KIR2DS4P43632 304 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 CLRN1P58418 232 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 HNRNPKP61978 463 aaKnown RBP eCLIP5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 OC90Q02509 493 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 MFGE8Q08431 387 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 PLA2G7Q13093 441 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 BTN1A1Q13410 526 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 KIR2DS1Q14954 304 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 RAB30Q15771 203 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 PRICKLE2Q7Z3G6 844 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 CCDC190Q86UF4 302 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 RDH10Q8IZV5 341 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 SLC22A24Q8N4F4 322 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 C3orf58Q8NDZ4 430 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 FOXJ1Q92949 421 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 TMEM106AQ96A25 262 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 AMDHD1Q96NU7 426 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 CLSTN3Q9BQT9 956 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 ZNF286AQ9HBT8 521 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 PNO1Q9NRX1 252 aaKnown RBP5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 KCNG2Q9UJ96 466 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 A0A1W2PQU0 124 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 MEN1O00255 615 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 GPR171O14626 319 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 DVL2O14641 736 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 FURINP09958 794 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 SBK2P0C263 348 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 CPMP14384 443 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 SOX3P41225 446 aa5.74□□□□□ -1.49
PRPF4B-205ENST00000480058 SIM1P81133 766 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms