RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FCRL1Q96LA6 429 aa14.04□□□□□ -0.16
DDX56-210ENST00000479440 THUMPD3Q9BV44 507 aaKnown RBP14.04□□□□□ -0.16
DDX56-210ENST00000479440 LAT2Q9GZY6 243 aa14.04□□□□□ -0.16
DDX56-210ENST00000479440 SAP130Q9H0E3 1048 aa14.04□□□□□ -0.16
DDX56-210ENST00000479440 CA10Q9NS85 328 aa14.04□□□□□ -0.16
DDX56-210ENST00000479440 ACER3Q9NUN7 267 aa14.04□□□□□ -0.16
DDX56-210ENST00000479440 PARPBPQ9NWS1 579 aa14.04□□□□□ -0.16
DDX56-210ENST00000479440 HDGFL3Q9Y3E1 203 aa14.04□□□□□ -0.16
DDX56-210ENST00000479440 EXOC1LA0A1B0GW35 172 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 SERINC4A6NH21 518 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 ANKRD28O15084 1053 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 DNAJA2O60884 412 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 EFNA1P20827 205 aaPredicted RBP14.03□□□□□ -0.16
DDX56-210ENST00000479440 FKBP2P26885 142 aaKnown RBP14.03□□□□□ -0.16
DDX56-210ENST00000479440 GIFP27352 417 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 MPGP29372 298 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 APOBEC1P41238 236 aaKnown RBP14.03□□□□□ -0.16
DDX56-210ENST00000479440 ASMTP46597 345 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 IDH3GP51553 393 aaPredicted RBP14.03□□□□□ -0.16
DDX56-210ENST00000479440 DVL1P1P54792 670 aaPredicted RBP14.03□□□□□ -0.16
DDX56-210ENST00000479440 RPL38P63173 70 aaKnown RBP14.03□□□□□ -0.16
DDX56-210ENST00000479440 SKP2Q13309 424 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 EFNB3Q15768 340 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 SPDYE7PQ495Y7 208 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 CFAP157Q5JU67 520 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 DEF8Q6ZN54 512 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 KATNB1Q9BVA0 655 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 NMUR2Q9GZQ4 415 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 METTL17Q9H7H0 456 aaPredicted RBP14.03□□□□□ -0.16
DDX56-210ENST00000479440 OBP2BQ9NPH6 170 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 CHRNA9Q9UGM1 479 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 TMED5Q9Y3A6 229 aa14.03□□□□□ -0.16
DDX56-210ENST00000479440 CSTAP01040 98 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 CRYAAP02489 173 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 UBTFL6P0CB48 400 aaPredicted RBP14.02□□□□□ -0.17
DDX56-210ENST00000479440 MYL2P10916 166 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 DAOP14920 347 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 PAX7P23759 505 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 IL2RGP31785 369 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 RPL3P39023 403 aaKnown RBP14.02□□□□□ -0.17
DDX56-210ENST00000479440 SLC1A3P43003 542 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 CCT3P49368 545 aaKnown RBP14.02□□□□□ -0.17
DDX56-210ENST00000479440 ABHD12BQ7Z5M8 362 aaPredicted RBP14.02□□□□□ -0.17
DDX56-210ENST00000479440 GLCCI1Q86VQ1 547 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 ZNF563Q8TA94 476 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 ZNF418Q8TF45 676 aaPredicted RBP14.02□□□□□ -0.17
DDX56-210ENST00000479440 NEU4Q8WWR8 484 aaPredicted RBP14.02□□□□□ -0.17
DDX56-210ENST00000479440 GCDHQ92947 438 aaPredicted RBP14.02□□□□□ -0.17
DDX56-210ENST00000479440 MOAP1Q96BY2 351 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 SLC38A2Q96QD8 506 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 SNX18Q96RF0 628 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 FMO2Q99518 471 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 PLK3Q9H4B4 646 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 SLC7A10Q9NS82 523 aa14.02□□□□□ -0.17
DDX56-210ENST00000479440 IGHV1-18A0A0C4DH31 117 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 FAM157AC9JC47 383 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 AK1P00568 194 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 OR4A8P0C604 315 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 NTF4P34130 210 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 CLK1P49759 484 aaKnown RBP14.01□□□□□ -0.17
DDX56-210ENST00000479440 ADIPOQQ15848 244 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 ZYG11AQ6WRX3 759 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 SFXN5Q8TD22 340 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 ACMSDQ8TDX5 336 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 OR5P2Q8WZ92 322 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 OR7D2Q96RA2 312 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 CTPS2Q9NRF8 586 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 GPATCH2Q9NW75 528 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 FLVCR1Q9Y5Y0 555 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 PTGDR2Q9Y5Y4 395 aa14.01□□□□□ -0.17
DDX56-210ENST00000479440 TMEM89A2RUT3 159 aa14□□□□□ -0.17
DDX56-210ENST00000479440 SCAMP2O15127 329 aaKnown RBP14□□□□□ -0.17
DDX56-210ENST00000479440 EIF1BO60739 113 aaKnown RBP14□□□□□ -0.17
DDX56-210ENST00000479440 LILRA1O75019 489 aa14□□□□□ -0.17
DDX56-210ENST00000479440 SLU7O95391 586 aaKnown RBP14□□□□□ -0.17
DDX56-210ENST00000479440 CHEK2O96017 543 aa14□□□□□ -0.17
DDX56-210ENST00000479440 OR2B6P58173 313 aa14□□□□□ -0.17
DDX56-210ENST00000479440 LGALS3BPQ08380 585 aa14□□□□□ -0.17
DDX56-210ENST00000479440 GPR68Q15743 365 aa14□□□□□ -0.17
DDX56-210ENST00000479440 ZNF141Q15928 474 aa14□□□□□ -0.17
DDX56-210ENST00000479440 TSPO2Q5TGU0 170 aa14□□□□□ -0.17
DDX56-210ENST00000479440 CLEC6AQ6EIG7 209 aa14□□□□□ -0.17
DDX56-210ENST00000479440 SHQ1Q6PI26 577 aaKnown RBP14□□□□□ -0.17
DDX56-210ENST00000479440 VHLLQ6RSH7 139 aa14□□□□□ -0.17
DDX56-210ENST00000479440 RNF165Q6ZSG1 346 aa14□□□□□ -0.17
DDX56-210ENST00000479440 EIF3MQ7L2H7 374 aaKnown RBP14□□□□□ -0.17
DDX56-210ENST00000479440 ZNF572Q7Z3I7 529 aaPredicted RBP14□□□□□ -0.17
DDX56-210ENST00000479440 GRINAQ7Z429 371 aa14□□□□□ -0.17
DDX56-210ENST00000479440 CCDC103Q8IW40 242 aa14□□□□□ -0.17
DDX56-210ENST00000479440 NATD1Q8N6N6 113 aa14□□□□□ -0.17
DDX56-210ENST00000479440 PSMA8Q8TAA3 256 aa14□□□□□ -0.17
DDX56-210ENST00000479440 WDR60Q8WVS4 1066 aa14□□□□□ -0.17
DDX56-210ENST00000479440 DNAJA3Q96EY1 480 aa14□□□□□ -0.17
DDX56-210ENST00000479440 ARL5BQ96KC2 179 aa14□□□□□ -0.17
DDX56-210ENST00000479440 NAA11Q9BSU3 229 aaPredicted RBP14□□□□□ -0.17
DDX56-210ENST00000479440 CCDC106Q9BWC9 280 aa14□□□□□ -0.17
DDX56-210ENST00000479440 MOV10Q9HCE1 1003 aaKnown RBP14□□□□□ -0.17
DDX56-210ENST00000479440 ATAD3AQ9NVI7 634 aa14□□□□□ -0.17
DDX56-210ENST00000479440 BAIAP2L1Q9UHR4 511 aa14□□□□□ -0.17
DDX56-210ENST00000479440 ATP6V1HQ9UI12 483 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms