RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SLC7A1P30825 629 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 RYKP34925 604 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 RNF144AP50876 292 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 GYS2P54840 703 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 CSNK2A1P68400 391 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 SELPLGQ14242 412 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 CAPRIN1Q14444 709 aaKnown RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 ZNF239Q16600 458 aaKnown RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 C8orf82Q6P1X6 216 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 TMPPEQ6ZT21 453 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 FAM214BQ7L5A3 538 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 RNF128Q8TEB7 428 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 RNASE6Q93091 150 aaKnown RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 ZNF845Q96IR2 970 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 POTEKPQ9BYX7 375 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 UCK2Q9BZX2 261 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 NPDC1Q9NQX5 325 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-217ENST00000479161 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 KLHL28Q9NXS3 571 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 OSGIN1Q9UJX0 560 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 PACSIN3Q9UKS6 424 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 A8MXE2 369 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 AP3D1O14617 1153 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 CXCL13O43927 109 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 FMO6PO60774 539 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 SHOX2O60902 331 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 SS18L1O75177 396 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 GCM2O75603 506 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 SHC1P29353 583 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 SFTPDP35247 375 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 KIR2DL2P43627 348 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 AGFG1P52594 562 aaKnown RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 SORDQ00796 357 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 SF3A3Q12874 501 aaKnown RBP eCLIP13.85□□□□□ -0.195e-7■■■□□ 14.8
C9orf3-217ENST00000479161 FOXF2Q12947 444 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 PDK3Q15120 406 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 C6orf89Q6UWU4 347 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 HMGN2P46Q86SG4 172 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 TREML1Q86YW5 311 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 ARMC8Q8IUR7 673 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 DMRTC2Q8IXT2 367 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 INTS12Q96CB8 462 aaKnown RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 STARD4Q96DR4 205 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 ZNF583Q96ND8 569 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 RSPO3Q9BXY4 272 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-217ENST00000479161 PRRG4Q9BZD6 226 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 PLSCR4Q9NRQ2 329 aa13.85□□□□□ -0.19
C9orf3-217ENST00000479161 NOTCH2Q04721 2471 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 TMED7-TICAM2A0A0A6YYA0 188 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 NKX2-6A6NCS4 301 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 FAM90A27PA6NNH2 459 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 M0QX08 132 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 DCTN3O75935 186 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 AQP8O94778 261 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 LGI1O95970 557 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 FAM107AO95990 144 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 CGAP01215 116 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 TACR3P29371 465 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 RABL3Q5HYI8 236 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 C5orf46Q6UWT4 87 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 KIF18BQ86Y91 864 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 OR6K3Q8NGY3 331 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 DNAJA4Q8WW22 397 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-217ENST00000479161 DDIT4LQ96D03 193 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 RCN3Q96D15 328 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 C14orf79Q96F83 325 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 LRRC37BQ96QE4 947 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 CCT8L2Q96SF2 557 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 SLC39A3Q9BRY0 314 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 TRIM2Q9C040 744 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 FAM107BQ9H098 131 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 TMEM185BQ9H7F4 350 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 TESQ9UGI8 421 aaKnown RBP13.84□□□□□ -0.19
C9orf3-217ENST00000479161 TMED7Q9Y3B3 224 aa13.84□□□□□ -0.19
C9orf3-217ENST00000479161 FAM220BPB1ANY3 271 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 C19orf84I3L1E1 186 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 EIF1BO60739 113 aaKnown RBP13.83□□□□□ -0.2
C9orf3-217ENST00000479161 CYTIPO60759 359 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 FZD7O75084 574 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 PRKD3O94806 890 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 IFNA14P01570 189 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 GKN3PP0CG01 181 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 COX6B1P14854 86 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 COL8A1P27658 744 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 KCNJ5P48544 419 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 DIO1P49895 249 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 H3F3AP84243 136 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 DMTNQ08495 405 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 SWT1Q5T5J6 900 aaKnown RBP13.83□□□□□ -0.2
C9orf3-217ENST00000479161 SLC15A3Q8IY34 581 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 POU5F2Q8N7G0 328 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 STK35Q8TDR2 534 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 ZNF559Q9BR84 538 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 SRXN1Q9BYN0 137 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 BCO1Q9HAY6 547 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 ELOVL5Q9NYP7 299 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 TMEM181Q9P2C4 612 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 KLHL9Q9P2J3 617 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 KCNN3Q9UGI6 736 aa13.83□□□□□ -0.2
C9orf3-217ENST00000479161 EMC9Q9Y3B6 208 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms