RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ZNF772Q68DY9 489 aaPredicted RBP3.95□□□□□ -1.78
UPF3B-203ENST00000478840 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 ENPP6Q6UWR7 440 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 MTURNQ8N3F0 131 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 ATP6V0D2Q8N8Y2 350 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 OR2L3Q8NG85 312 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 OR2A12Q8NGT7 310 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 PAQR8Q8TEZ7 354 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 NUS1Q96E22 293 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 KCNA7Q96RP8 456 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 SRXN1Q9BYN0 137 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 GFRA4Q9GZZ7 299 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 PNNQ9H307 717 aaKnown RBP3.95□□□□□ -1.78
UPF3B-203ENST00000478840 AZI2Q9H6S1 392 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 NT5MQ9NPB1 228 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 GON4LQ3T8J9 2241 aa3.95□□□□□ -1.78
UPF3B-203ENST00000478840 SRRM5B3KS81 715 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 DNALI1O14645 258 aaPredicted RBP3.94□□□□□ -1.78
UPF3B-203ENST00000478840 RGS16O15492 202 aaPredicted RBP3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CST1P01037 141 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 KRT14P02533 472 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 GAPDHP04406 335 aaKnown RBP3.94□□□□□ -1.78
UPF3B-203ENST00000478840 PABPC4LP0CB38 370 aaKnown RBP3.94□□□□□ -1.78
UPF3B-203ENST00000478840 RNH1P13489 461 aaKnown RBP3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CD1CP29017 333 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 IL2RGP31785 369 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CASP14P31944 242 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 RIPK4P57078 832 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CHRNB3Q05901 458 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 ASPHQ12797 758 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 ZNF77Q15935 545 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 PRR4Q16378 134 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 QRICH1Q2TAL8 776 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 DMRTC1Q5HYR2 192 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CARD17Q5XLA6 110 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 UTS2BQ765I0 119 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 GPR65Q8IYL9 337 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 SPATA4Q8NEY3 305 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 C12orf42Q96LP6 360 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CLCC1Q96S66 551 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CCT8L2Q96SF2 557 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 APOL2Q9BQE5 337 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CHIAQ9BZP6 476 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 NMRAL1Q9HBL8 299 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 MIEF1Q9NQG6 463 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CUTCQ9NTM9 273 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 OR1A1Q9P1Q5 309 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 ABCG2Q9UNQ0 655 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 CLSPNQ9HAW4 1339 aa3.94□□□□□ -1.78
UPF3B-203ENST00000478840 A0A075B6Q4 140 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 A0A1B0GUS0 222 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 CCDC182A6NF36 153 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 VSTM2BA6NLU5 285 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 DHRS7CA6NNS2 312 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 PHF1O43189 567 aaPredicted RBP3.93□□□□□ -1.78
UPF3B-203ENST00000478840 GPAA1O43292 621 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 ZNF853P0CG23 659 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 SLC35E2P0CK97 266 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 TROVE2P10155 538 aaKnown RBP eCLIP3.93□□□□□ -1.78
UPF3B-203ENST00000478840 MCF2P10911 925 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 IGLL1P15814 213 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 DDOSTP39656 456 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 PLK1P53350 603 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 IST1P53990 364 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 PLP1P60201 277 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 KRTAP10-9P60411 292 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 CXCL6P80162 114 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 ZFP36L1Q07352 338 aaKnown RBP3.93□□□□□ -1.78
UPF3B-203ENST00000478840 CD47Q08722 323 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 ASAH1Q13510 395 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 SERTAD2Q14140 314 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 SBK1Q52WX2 424 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 PAN3Q58A45 887 aaKnown RBP3.93□□□□□ -1.78
UPF3B-203ENST00000478840 LRRC66Q68CR7 880 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 TMEM107Q6UX40 140 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 CXCL17Q6UXB2 119 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 CEP112Q8N8E3 955 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 AGAP11Q8TF27 550 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 TM4SF19Q96DZ7 209 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 OR5M11Q96RB7 305 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 TBX15Q96SF7 602 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 REEP4Q9H6H4 257 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 NARFLQ9H6Q4 476 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 EXO5Q9H790 373 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 BFARQ9NZS9 450 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 IKZF2Q9UKS7 526 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 COPS3Q9UNS2 423 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 CSDC2Q9Y534 153 aaKnown RBP3.93□□□□□ -1.78
UPF3B-203ENST00000478840 POGZQ7Z3K3 1410 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 TTC21BQ7Z4L5 1316 aa3.93□□□□□ -1.78
UPF3B-203ENST00000478840 TCP11X1B4DZS4 312 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 CTAG2O75638 210 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SLITRK3O94933 977 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 KRT6AP02538 564 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 ASGR1P07306 291 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SHC1P29353 583 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 EPHX2P34913 555 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SLC25A1P53007 311 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms