RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 UBE2UQ5VVX9 321 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 BTLAQ7Z6A9 289 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GDPD1Q8N9F7 314 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 PHLDA1Q8WV24 401 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 ZCCHC14Q8WYQ9 949 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 BCL2L2Q92843 193 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 ZG16BQ96DA0 208 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TMEM101Q96IK0 257 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 INPP4AQ96PE3 977 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 WDR13Q9H1Z4 485 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ABCB8Q9NUT2 735 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TET3O43151 1660 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 A0A1B0GTQ1 180 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 J3QLW9 94 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TMEM127O75204 238 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 RPS17P08708 135 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 RAB40ALP0C0E4 278 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 H2AFB1P0C5Y9 115 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ZNF19P17023 458 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 CD38P28907 300 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 DLX1P56177 255 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HTRA4P83105 476 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 PGM5Q15124 567 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 RNF151Q2KHN1 245 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 RNASE12Q5GAN4 147 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 PSMG4Q5JS54 123 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 USP17L6PQ6QN14 398 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 IGDCC3Q8IVU1 814 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OR5AS1Q8N127 324 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 EID2Q8N6I1 236 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HUS1BQ8NHY5 278 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 CANT1Q8WVQ1 401 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 RAB40AQ8WXH6 277 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HSD17B8Q92506 261 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 PYCR2Q96C36 320 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SDSLQ96GA7 329 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 PWWP2AQ96N64 755 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SEBOXQ9HB31 216 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 SSU72Q9NP77 194 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 PRKAB1Q9Y478 270 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 UBIAD1Q9Y5Z9 338 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HS3ST4Q9Y661 456 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ELOA3CA0A087WX78 387 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 ANKRD20A5PA0PJZ0 165 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TSPAN11A1L157 253 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OOEPA6NGQ2 149 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TOXO94900 526 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 CA3P07451 260 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SULT1A3P0DMM9 295 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SULT1A4P0DMN0 295 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 CLCN3P51790 818 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TMEM62Q0P6H9 643 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ENTPD8Q5MY95 495 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ZNF705AQ6ZN79 300 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 SFTPA2Q8IWL1 248 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SFTPA1Q8IWL2 248 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OR10G2Q8NGC3 310 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OR52P1PQ8NH57 321 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SPOCK2Q92563 424 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 DOHHQ9BU89 302 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 CLMPQ9H6B4 373 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OBP2BQ9NPH6 170 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 DLL4Q9NR61 685 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 KPTNQ9Y664 436 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 DNASE2O00115 360 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 TAAR5O14804 337 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SOCS5O75159 536 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GABRR1P24046 479 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 PRSS3P35030 304 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GPR85P60893 370 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SORDQ00796 357 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 IL10RBQ08334 325 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 EGFLAMQ63HQ2 1017 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 UQCC3Q6UW78 93 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 PPP1R3BQ86XI6 285 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OR8J2Q8NGG1 315 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GPR152Q8TDT2 470 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 LHPPQ9H008 270 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ATG10Q9H0Y0 220 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 B3GNT3Q9Y2A9 372 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 PRAG1Q86YV5 1406 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 KIR2DS1A0A191URI9 304 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 K7EPK0 472 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 CDC14BO60729 498 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ATXN1LP0C7T5 689 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 EIF1P41567 113 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 KIR2DS4P43632 304 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HNRNPA3P51991 378 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 WNT7BP56706 349 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SMAD3P84022 425 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 NFATC4Q14934 902 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 KIR2DS1Q14954 304 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 NR0B2Q15466 257 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 VAMP3Q15836 100 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SLC25A52Q3SY17 297 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ZNF626Q68DY1 528 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GK5Q6ZS86 529 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 FAM71E2Q8N5Q1 922 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 MFSD9Q8NBP5 474 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms