RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ADAM19Q9H013 955 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 BCL2L10Q9HD36 194 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 INTS9Q9NV88 658 aaKnown RBP20.82■□□□□ 0.92
C9orf3-215ENST00000478473 ARGLU1Q9NWB6 273 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-215ENST00000478473 MAP1AP78559 2803 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-215ENST00000478473 FREM1Q5H8C1 2179 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 A0A096LPI6 279 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 AP3D1O14617 1153 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 CNOT4O95628 575 aaKnown RBP20.81■□□□□ 0.92
C9orf3-215ENST00000478473 SLC1A3P43003 542 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 CRATP43155 626 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 OR3A2P47893 321 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 IDH2P48735 452 aaKnown RBP20.81■□□□□ 0.92
C9orf3-215ENST00000478473 H3F3AP84243 136 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 P2RY6Q15077 328 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 RGNQ15493 299 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 DEFB113Q30KQ7 82 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 RNF220Q5VTB9 566 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 OR52P1PQ8NH57 321 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 ARL5BQ96KC2 179 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 USB1Q9BQ65 265 aaKnown RBP20.81■□□□□ 0.92
C9orf3-215ENST00000478473 RAD21L1Q9H4I0 556 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 C12orf49Q9H741 205 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 OSGIN1Q9UJX0 560 aa20.81■□□□□ 0.92
C9orf3-215ENST00000478473 UQCRHLA0A096LP55 91 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 IGHV3-15A0A0B4J1V0 119 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 A0A0G2JPF8 293 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 CFAP73A6NFT4 308 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 HNRNPCL2B2RXH8 293 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 HNRNPCL3B7ZW38 293 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 SULT2B1O00204 365 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 CLIC1O00299 241 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 HNRNPCL1O60812 293 aaKnown RBP20.8■□□□□ 0.92
C9orf3-215ENST00000478473 HNRNPCL4P0DMR1 293 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 KLK2P20151 261 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 SLC16A1P53985 500 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 AQP5P55064 265 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 RASGEF1BQ0VAM2 473 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 KEAP1Q14145 624 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 LIN52Q52LA3 116 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 C6orf10Q5SRN2 563 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 SLC2A7Q6PXP3 512 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 STEAP2Q8NFT2 490 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 SLC35B4Q969S0 331 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 MAGEB18Q96M61 343 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 PIP5K1AQ99755 562 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 TMUB1Q9BVT8 246 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 ACTR6Q9GZN1 396 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 A4GALTQ9NPC4 353 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 SLC25A37Q9NYZ2 338 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 CHST2Q9Y4C5 530 aa20.8■□□□□ 0.92
C9orf3-215ENST00000478473 MTORP42345 2549 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 TRBV5-3A0A0A0MS03 114 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 ZNF716A6NP11 495 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 ZNF814B7Z6K7 855 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 BCHEP06276 602 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 FESP07332 822 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 ACAA2P42765 397 aaKnown RBP20.79■□□□□ 0.92
C9orf3-215ENST00000478473 POLR2HP52434 150 aaKnown RBP20.79■□□□□ 0.92
C9orf3-215ENST00000478473 BEX5Q5H9J7 111 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 SFRP5Q5T4F7 317 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 ANKRD34AQ69YU3 496 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 Q6ZT83 130 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 TGIF2LYQ8IUE0 185 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 MSRB3Q8IXL7 192 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 GOLGA6L1Q8N7Z2 621 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 DYDC1Q8WWB3 177 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 SPDL1Q96EA4 605 aa20.79■□□□□ 0.92
C9orf3-215ENST00000478473 BEX4Q9NWD9 120 aaPredicted RBP20.79■□□□□ 0.92
C9orf3-215ENST00000478473 TMED7-TICAM2A0A0A6YYA0 188 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 UQCRBP14927 111 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 ZNF836Q6ZNA1 936 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 CXorf67Q86X51 503 aaPredicted RBP20.78■□□□□ 0.92
C9orf3-215ENST00000478473 VRK2Q86Y07 508 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 PIK3IP1Q96FE7 263 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 TMEM19Q96HH6 336 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 HS3ST6Q96QI5 342 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 TMEM204Q9BSN7 226 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 RLIMQ9NVW2 624 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 TMEM181Q9P2C4 612 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 ZNF443Q9Y2A4 671 aaPredicted RBP20.78■□□□□ 0.92
C9orf3-215ENST00000478473 IFT52Q9Y366 437 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 TMED7Q9Y3B3 224 aa20.78■□□□□ 0.92
C9orf3-215ENST00000478473 RAI1Q7Z5J4 1906 aaPredicted RBP20.77■□□□□ 0.92
C9orf3-215ENST00000478473 TACR3P29371 465 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 ITGADQ13349 1161 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 GALNT5Q7Z7M9 940 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 ZHX1-C8orf76Q96EF9 292 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 ZNF300Q96RE9 604 aaPredicted RBP20.77■□□□□ 0.92
C9orf3-215ENST00000478473 SPATA9Q9BWV2 254 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 OR11A1Q9GZK7 315 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 CCDC167Q9P0B6 97 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 SLAMF8Q9P0V8 285 aa20.77■□□□□ 0.92
C9orf3-215ENST00000478473 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.76■□□□□ 0.91
C9orf3-215ENST00000478473 TMEM247A6NEH6 219 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 NUDT7P0C024 238 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 TFPIP10646 304 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 PPIBP23284 216 aaKnown RBP20.76■□□□□ 0.91
C9orf3-215ENST00000478473 HOXC12P31275 282 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 NR1H2P55055 460 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms