RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TNFRSF10DQ9UBN6 386 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SATB2Q9UPW6 733 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CLCA2Q9UQC9 943 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 POLHQ9Y253 713 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM5Q9Y2B1 443 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CAB39Q9Y376 341 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CHST2Q9Y4C5 530 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CREBBPQ92793 2442 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CACNA1IQ9P0X4 2223 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 A0A1W2PS29 197 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM82A0PJX8 343 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 TRAPPC13A5PLN9 417 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 FABP12A6NFH5 140 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 UNC119BA6NIH7 251 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 WWP2O00308 870 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 POLR1CO15160 346 aaPredicted RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 SEC14L5O43304 696 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 FRS3O43559 492 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 HCN1O60741 890 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 STX11O75558 287 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 SOX30O94993 753 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 RCBTB2O95199 551 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 HLA-DPB1P04440 258 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 KRT8P05787 483 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 GUSBP08236 651 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MSL3P1P0C860 447 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 LIMS3P0CW19 117 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 LIMS4P0CW20 117 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 LAMP2P13473 410 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 UGT2B7P16662 529 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 CD53P19397 219 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MAGP20916 626 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 RPS4Y1P22090 263 aaKnown RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 HNRNPA2B1P22626 353 aaKnown RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MAT2AP31153 395 aaKnown RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ACTR1BP42025 376 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 GPR4P46093 362 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 CAPZA2P47755 286 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 RIPPLY3P57055 190 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 OR2B6P58173 313 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ACTR1AP61163 376 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 YPEL5P62699 121 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 PPP2CBP62714 309 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 PPP2CAP67775 309 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MRPS21P82921 87 aaKnown RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 BDH1Q02338 343 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MXD1Q05195 221 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ASAH1Q13510 395 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 GPR50Q13585 617 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 RUNX2Q13950 521 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 TRAM1Q15629 374 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 KCNJ8Q15842 424 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF79Q15937 498 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 DUSP5Q16690 384 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 NDUFA5Q16718 116 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ZSWIM7Q19AV6 140 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 GLYR1Q49A26 553 aaPredicted RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM177Q53S58 311 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF628Q5EBL2 1059 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM196Q5HYL7 178 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MANEAQ5SRI9 462 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 PDZK1Q5T2W1 519 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 FHL5Q5TD97 284 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 OR2G6Q5TZ20 316 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 RSBN1Q5VWQ0 802 aaPredicted RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 FBXO42Q6P3S6 717 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MZT2AQ6P582 158 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 SYCE2Q6PIF2 218 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 FAM111BQ6SJ93 734 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 PARM1Q6UWI2 310 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 FAM131AQ6UXB0 335 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF517Q6ZMY9 492 aaPredicted RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 RNF44Q7L0R7 432 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 CXXC5Q7LFL8 322 aaKnown RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 MARCH9Q86YJ5 346 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 NKAIN4Q8IVV8 208 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 LAX1Q8IWV1 398 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 TRIM48Q8IWZ4 208 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 NRMQ8IXM6 262 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 SLC43A2Q8N370 569 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 COX18Q8N8Q8 333 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 CDRT4Q8N9R6 151 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF485Q8NCK3 441 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 SMRP1Q8NCR6 262 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 OR7G2Q8NG99 324 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 OR52L1Q8NGH7 329 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 FLVCR1-AS1Q8TAF5 88 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ZCCHC10Q8TBK6 192 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 BRIX1Q8TDN6 353 aaKnown RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 JPH3Q8WXH2 748 aaPredicted RBP4.56□□□□□ -1.68
SF3B6-202ENST00000478050 TM9SF4Q92544 642 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 C1GALT1C1Q96EU7 318 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 SIPA1Q96FS4 1042 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 DIRAS2Q96HU8 199 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 OR2A5Q96R48 311 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 SDF2Q99470 211 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 CTRCQ99895 268 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 KATNB1Q9BVA0 655 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF350Q9GZX5 532 aa4.56□□□□□ -1.68
SF3B6-202ENST00000478050 HOXD1Q9GZZ0 328 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms