RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 CNIH3Q8TBE1 160 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 FAM110BQ8TC76 370 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 EEF1AKMT1Q8WVE0 214 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 DNAJA4Q8WW22 397 aaPredicted RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 HTRA1Q92743 480 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 GGHQ92820 318 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 PSMG2Q969U7 264 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 LINGO1Q96FE5 620 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 RADILQ96JH8 1075 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 FCRL1Q96LA6 429 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 HYLS1Q96M11 299 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 RPRD1AQ96P16 312 aaPredicted RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 KLHL5Q96PQ7 755 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 MND1Q9BWT6 205 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 ZBP1Q9H171 429 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 P2RY12Q9H244 342 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 RIBC2Q9H4K1 309 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 TMEM38AQ9H6F2 299 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 NT5DC2Q9H857 520 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 BRF2Q9HAW0 419 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 PDFQ9HBH1 243 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 ZNF334Q9HCZ1 680 aaPredicted RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 RPRD1BQ9NQG5 326 aaKnown RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 DDX28Q9NUL7 540 aaKnown RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 IMPAD1Q9NX62 359 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 THUMPD1Q9NXG2 353 aaKnown RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 B3GNT2Q9NY97 397 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 SLC25A37Q9NYZ2 338 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 MARCH4Q9P2E8 410 aaPredicted RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 ZNF282Q9UDV7 671 aaPredicted RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 IKZF3Q9UKT9 509 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 NUP50Q9UKX7 468 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 RAB23Q9ULC3 237 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 ZNF490Q9ULM2 529 aaPredicted RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 RPL36Q9Y3U8 105 aaKnown RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 NEUROG3Q9Y4Z2 214 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 POLR3HQ9Y535 204 aaPredicted RBP4.16□□□□□ -1.74
LMBR1-216ENST00000477983 ARL5AQ9Y689 179 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 GREB1Q4ZG55 1949 aa4.16□□□□□ -1.74
LMBR1-216ENST00000477983 PTPRSQ13332 1948 aa4.15□□□□□ -1.74
LMBR1-216ENST00000477983 A0A1W2PQ67 120 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MEIOCA2RUB1 952 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 TUBAL3A6NHL2 446 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 HIDE1A8MVS5 230 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MAGEB17A8MXT2 336 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MYO1GB0I1T2 1018 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 ZNF670-ZNF695F2Z2N8 137 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 SLC30A4O14863 429 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 CCL16O15467 120 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 HOXC11O43248 304 aaPredicted RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 KCNK5O95279 499 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 HLA-DQB1P01920 261 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 C1QBP02746 253 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MT-ND1P03886 318 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 HIST1H2AGP0C0S8 130 aaPredicted RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MPC1LP0DKB6 136 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MYOGP15173 224 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 GJA1P17302 382 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 GABRB1P18505 474 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 HIST1H2ADP20671 130 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 GADD45AP24522 165 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 CXCR2P25025 360 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 GABRR2P28476 465 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 PRDX3P30048 256 aaKnown RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 FMO3P31513 532 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 CSTF2P33240 577 aaKnown RBP eCLIP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 ARL1P40616 181 aaPredicted RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 NSG1P42857 185 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 PPM1FP49593 454 aaPredicted RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 SGSHP51688 502 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 FUT6P51993 359 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 IST1P53990 364 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 AP1S1P61966 158 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 BTG1P62324 171 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 HSPA14Q0VDF9 509 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 ST3GAL4Q11206 333 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 COX10Q12887 443 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MLLT11Q13015 90 aaPredicted RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 ILKQ13418 452 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 SIM2Q14190 667 aaPredicted RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 NDUFA9Q16795 377 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 SYT16Q17RD7 645 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 ZNF630Q2M218 657 aaPredicted RBP4.15□□□□□ -1.75
LMBR1-216ENST00000477983 IQCCQ4KMZ1 466 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 GPAT3Q53EU6 434 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 SPANXN4Q5MJ08 99 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 ATAD3CQ5T2N8 411 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 PDZK1Q5T2W1 519 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 DDI2Q5TDH0 399 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 TXNDC8Q6A555 127 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 SIGIRRQ6IA17 410 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 OR4F3Q6IEY1 312 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 WDR73Q6P4I2 378 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 TMEM179BQ7Z7N9 219 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 DSG4Q86SJ6 1040 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 TMEM150AQ86TG1 271 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 MSRB3Q8IXL7 192 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 GPR65Q8IYL9 337 aa4.15□□□□□ -1.75
LMBR1-216ENST00000477983 SPERTQ8NA61 448 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms