RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	AIPL1	Q9NZN9	384 aa		2.86	□□□□□ -1.95
RBM39-231	ENST00000477334	NAP1L2	Q9ULW6	460 aa	Predicted RBP	2.86	□□□□□ -1.95
RBM39-231	ENST00000477334	IGHV2-70D	A0A0C4DH43	119 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	CTAGE15	A4D2H0	777 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	PCP4L1	A6NKN8	68 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334		H0Y8G0	127 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	XPO1	O14980	1071 aa	Known RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	PRKY	O43930	277 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	UGT2B17	O75795	530 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	SLITRK3	O94933	977 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	LALBA	P00709	142 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	RNH1	P13489	461 aa	Known RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	CA8	P35219	290 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	PRKX	P51817	358 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	ZNF133	P52736	654 aa	Predicted RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	AP3M2	P53677	418 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	HSPA2	P54652	639 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	ATP5I	P56385	69 aa	Predicted RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	KRTAP10-8	P60410	259 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	CCDC173	Q0VFZ6	552 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	GTF3C1	Q12789	2109 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	IL24	Q13007	206 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	ZNF630	Q2M218	657 aa	Predicted RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	GGTA1P	Q4G0N0	100 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	CCDC137	Q6PK04	289 aa	Known RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	NANOGNB	Q7Z5D8	188 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	CTAGE6	Q86UF2	777 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	TPRA1	Q86W33	373 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	STXBP6	Q8NFX7	210 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	OR56B2P	Q8NGI1	322 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	RNF138	Q8WVD3	245 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	SPRYD4	Q8WW59	207 aa	Predicted RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	ELSPBP1	Q96BH3	223 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	EBF4	Q9BQW3	602 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	GCOM2	Q9BZD3	368 aa	Predicted RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	NAT10	Q9H0A0	1025 aa	Known RBP	2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	ZNF385D	Q9H6B1	395 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	NMRK1	Q9NWW6	199 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	DCDC2	Q9UHG0	476 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	TTC21B	Q7Z4L5	1316 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	THSD7B	Q9C0I4	1608 aa		2.85	□□□□□ -1.95
RBM39-231	ENST00000477334	USP27X	A6NNY8	438 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	SURF6	O75683	361 aa	Known RBP	2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	BBOX1	O75936	387 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	LRAT	O95237	230 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	PAX7	P23759	505 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	CCNC	P24863	283 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	CD1B	P29016	333 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	LEP	P41159	167 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	PLK1	P53350	603 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	AIF1	P55008	147 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	APOC4	P55056	127 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	BID	P55957	195 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	CSTF1	Q05048	431 aa	Known RBP	2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	CHRNB3	Q05901	458 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	DDX39B	Q13838	428 aa	Known RBP	2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	IMMT	Q16891	758 aa	Known RBP	2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	PYHIN1	Q6K0P9	492 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	ZNF530	Q6P9A1	599 aa	Predicted RBP	2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	VRK2	Q86Y07	508 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	ZNF679	Q8IYX0	411 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	ATP6V0D2	Q8N8Y2	350 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	CCDC71L	Q8N9Z2	235 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	DCAF4L2	Q8NA75	395 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	ZNF740	Q8NDX6	193 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	STEAP2	Q8NFT2	490 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	OR52K2	Q8NGK3	314 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	OR13C2	Q8NGS9	318 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	OR56B4	Q8NH76	319 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	TRMT10A	Q8TBZ6	339 aa	Known RBP	2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	RNF139	Q8WU17	664 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	OR1E3	Q8WZA6	343 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	FAM3C	Q92520	227 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	RAPGEF5	Q92565	580 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	TPD52L3	Q96J77	140 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	PGLYRP4	Q96LB8	373 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	ARHGDIG	Q99819	225 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	GAL3ST1	Q99999	423 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	KLHDC3	Q9BQ90	382 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	SPATA16	Q9BXB7	569 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	MAGT1	Q9H0U3	335 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	ZDHHC11	Q9H8X9	412 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	NANOG	Q9H9S0	305 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	ELOVL3	Q9HB03	270 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	TM9SF3	Q9HD45	589 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	CLEC4A	Q9UMR7	237 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	NEU3	Q9UQ49	428 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	OR10H1	Q9Y4A9	318 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	UGT2A1	Q9Y4X1	527 aa		2.84	□□□□□ -1.95
RBM39-231	ENST00000477334	PTCH1	Q13635	1447 aa		2.84	□□□□□ -1.96
RBM39-231	ENST00000477334	RLF	Q13129	1914 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334		A0A0G2JRQ6	117 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334	FAM47DP	A6NHR8	397 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334		E7ESA3	106 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334	PRRG1	O14668	218 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334	RS1	O15537	224 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334	BCAS1	O75363	584 aa	Predicted RBP	2.83	□□□□□ -1.96
RBM39-231	ENST00000477334	ECI2	O75521	394 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334	CIB2	O75838	187 aa		2.83	□□□□□ -1.96
RBM39-231	ENST00000477334	ALOX5	P09917	674 aa		2.83	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms