RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CCT7Q99832 543 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 ACTRT3Q9BYD9 372 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 LAT2Q9GZY6 243 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 RAB1BQ9H0U4 201 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 SLC7A10Q9NS82 523 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 SERINC4A6NH21 518 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 DNPH1O43598 174 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 PDE5AO76074 875 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 PMS2P2O95744 297 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 WNT11O96014 354 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 SNRPAP09012 282 aaKnown RBP9.88□□□□□ -0.83
BRCA1-213ENST00000476777 OR4A8P0C604 315 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 TFPIP10646 304 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 SDC1P18827 310 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 PCMT1P22061 227 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 H3F3AP84243 136 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 SLC7A5Q01650 507 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 TGFBR3Q03167 851 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 LGALS3BPQ08380 585 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 RIN1Q13671 783 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 TRIP10Q15642 601 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 PDLIM3Q53GG5 364 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-213ENST00000476777 PDZK1Q5T2W1 519 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 CASP12Q6UXS9 341 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 TIFABQ6ZNK6 161 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 LCA5Q86VQ0 697 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 CCNYL1Q8N7R7 359 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 CLHC1Q8NHS4 586 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 ADAMTS15Q8TE58 950 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 ZHX1-C8orf76Q96EF9 292 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 DNAJA3Q96EY1 480 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 CCDC106Q9BWC9 280 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 CDC42EP4Q9H3Q1 356 aaKnown RBP9.88□□□□□ -0.83
BRCA1-213ENST00000476777 ACER3Q9NUN7 267 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 GPATCH2Q9NW75 528 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 C1orf109Q9NX04 203 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 UPB1Q9UBR1 384 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 BAIAP2L1Q9UHR4 511 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 KCNE5Q9UJ90 142 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 FLVCR1Q9Y5Y0 555 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 PTGDR2Q9Y5Y4 395 aa9.88□□□□□ -0.83
BRCA1-213ENST00000476777 IGHV1-18A0A0C4DH31 117 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 CENPVL1A0A0U1RR11 272 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 KLF11O14901 512 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 CRCPO75575 148 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 CYP7B1O75881 506 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 RGS9O75916 674 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-213ENST00000476777 URI1O94763 535 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-213ENST00000476777 MPGP29372 298 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 MAGEA8P43361 318 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 CCT3P49368 545 aaKnown RBP9.87□□□□□ -0.83
BRCA1-213ENST00000476777 HIKESHIQ53FT3 197 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 PRR31Q5SQ13 230 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 TSPO2Q5TGU0 170 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 KLHL24Q6TFL4 600 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 UGT2A3Q6UWM9 527 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 THSD4Q6ZMP0 1018 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 ZCCHC24Q8N2G6 241 aaKnown RBP9.87□□□□□ -0.83
BRCA1-213ENST00000476777 ZNF786Q8N393 782 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 OR2T11Q8NH01 316 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 PSMA8Q8TAA3 256 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 NEU4Q8WWR8 484 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-213ENST00000476777 TMEM234Q8WY98 164 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 BOD1Q96IK1 185 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 SLC38A2Q96QD8 506 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 SDF2Q99470 211 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 NMUR2Q9GZQ4 415 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 PARPBPQ9NWS1 579 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 CHRNA9Q9UGM1 479 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 SLC9A8Q9Y2E8 581 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 HDGFL3Q9Y3E1 203 aa9.87□□□□□ -0.83
BRCA1-213ENST00000476777 B4DSR2 109 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 H3BQF6 201 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 GSTA1P08263 222 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 UBTFL6P0CB48 400 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-213ENST00000476777 APOBEC1P41238 236 aaKnown RBP9.86□□□□□ -0.83
BRCA1-213ENST00000476777 ASMTP46597 345 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 HILS1P60008 231 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 TP53BP2Q13625 1128 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 CCNIQ14094 377 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 ZNF141Q15928 474 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 RFTN2Q52LD8 501 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-213ENST00000476777 VHLLQ6RSH7 139 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 FRMD7Q6ZUT3 714 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 USP43Q70EL4 1123 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 PEG10Q86TG7 708 aaKnown RBP9.86□□□□□ -0.83
BRCA1-213ENST00000476777 GLCCI1Q86VQ1 547 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 OR56A1Q8NGH5 318 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 ZNF418Q8TF45 676 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-213ENST00000476777 MTERF3Q96E29 417 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 OR7D2Q96RA2 312 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 KCNS3Q9BQ31 491 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 KATNB1Q9BVA0 655 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 OR11A1Q9GZK7 315 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 SAP130Q9H0E3 1048 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 OBP2BQ9NPH6 170 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 CTPS2Q9NRF8 586 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 FAF1Q9UNN5 650 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-213ENST00000476777 TRAPPC4Q9Y296 219 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 SPEF1Q9Y4P9 236 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms