RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CST6Q15828 149 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 ISXQ2M1V0 245 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 ZNF311Q5JNZ3 666 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 TRIQKQ629K1 86 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 KIAA0895LQ68EN5 471 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 TYW3Q6IPR3 259 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 MFSD12Q6NUT3 480 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 RPL13AP3Q6NVV1 102 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 FAM180BQ6P0A1 224 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 ZCCHC12Q6PEW1 402 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 BAIAP2L2Q6UXY1 529 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 USP53Q70EK8 1073 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 LHFPL3Q86UP9 236 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 GLCCI1Q86VQ1 547 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 VRK2Q86Y07 508 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 GRAMD2AQ8IUY3 354 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 GPALPP1Q8IXQ4 340 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 SYS1Q8N2H4 156 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 CADM2Q8N3J6 435 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 UXS1Q8NBZ7 420 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 SRFBP1Q8NEF9 429 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 OR2T33Q8NG76 320 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 OR11H7Q8NGC8 314 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 OR2I1PQ8NGU4 316 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 FLVCR1-AS1Q8TAF5 88 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 ABHD4Q8TB40 342 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 ZCCHC14Q8WYQ9 949 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 OR8D1Q8WZ84 308 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 EXOSC8Q96B26 276 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 SLC41A3Q96GZ6 507 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 SECISBP2Q96T21 854 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 CDC6Q99741 560 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 NRTNQ99748 197 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 THAP7Q9BT49 309 aaPredicted RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 WACQ9BTA9 647 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 HDHD5Q9BXW7 423 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 RSPH9Q9H1X1 276 aaPredicted RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 KCNN2Q9H2S1 579 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 C6orf106Q9H6K1 298 aaPredicted RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 RANBP3Q9H6Z4 567 aaPredicted RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 TRIM45Q9H8W5 580 aaPredicted RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 IL21RQ9HBE5 538 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 SLC6A20Q9NP91 592 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 IMP3Q9NV31 184 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 MED9Q9NWA0 146 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 MCUBQ9NWR8 336 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 LYARQ9NX58 379 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 ANKRD10Q9NXR5 420 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 ABRACLQ9P1F3 81 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 APOBEC3BQ9UH17 382 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 CLCA2Q9UQC9 943 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 SIGLEC7Q9Y286 467 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 ZNF443Q9Y2A4 671 aaPredicted RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 SLC17A4Q9Y2C5 497 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 GPR52Q9Y2T5 361 aa6.33□□□□□ -1.4
UBR4-212ENST00000475973 PCDHGA9Q9Y5G4 932 aaKnown RBP6.33□□□□□ -1.4
UBR4-212ENST00000475973 LOC102723532A0A0G2JNH3 316 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 A0A1B0GVT2 93 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 FEZF1A0PJY2 475 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 TRAPPC13A5PLN9 417 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 OR6C65A6NJZ3 312 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 SLC22A31A6NKX4 558 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 C1QTNF9BB2RNN3 333 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 KPNA3O00505 521 aaPredicted RBP6.32□□□□□ -1.4
UBR4-212ENST00000475973 MID1O15344 667 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 YKT6O15498 198 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 AKR7A2O43488 359 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 TNFSF14O43557 240 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 OR1F1O43749 312 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 FBXO24O75426 580 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 ITGA10O75578 1167 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 SLC2A10O95528 541 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 IGF2P01344 180 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 RAF1P04049 648 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 EIF4EP06730 217 aaKnown RBP6.32□□□□□ -1.4
UBR4-212ENST00000475973 UCHL1P09936 223 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 SBK2P0C263 348 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 FTH1P19P0C7X4 201 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 C1QTNF9P0C862 333 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 CD37P11049 281 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 PSKH1P11801 424 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 PEPDP12955 493 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 ATF4P18848 351 aaPredicted RBP6.32□□□□□ -1.4
UBR4-212ENST00000475973 C5AR1P21730 350 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 PSMB5P28074 263 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 SHC1P29353 583 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 PBLDP30039 288 aaPredicted RBP6.32□□□□□ -1.4
UBR4-212ENST00000475973 CALCRP30988 508 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 DRD3P35462 400 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 GRK6P43250 576 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 PITPNBP48739 271 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 NRG3P56975 720 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 TAS2R41P59536 307 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 MGAT2Q10469 447 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 BAMBIQ13145 260 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 INSL4Q14641 139 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 LASP1Q14847 261 aaKnown RBP6.32□□□□□ -1.4
UBR4-212ENST00000475973 MFSD13AQ14CX5 517 aa6.32□□□□□ -1.4
UBR4-212ENST00000475973 FCN2Q15485 313 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms