RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 CYTIPO60759 359 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 BCAS1O75363 584 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 FESP07332 822 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 YES1P07947 543 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 TFPIP10646 304 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 ETFAP13804 333 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 IDH2P48735 452 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 CLK1P49759 484 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 MVDP53602 400 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 PLAURQ03405 335 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 RASGEF1BQ0VAM2 473 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 FADDQ13158 208 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 ZSWIM7Q19AV6 140 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 GTDC1Q4AE62 458 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 SLC2A7Q6PXP3 512 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 TMPPEQ6ZT21 453 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 Q71RC1 249 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 TUSC5Q8IXB3 177 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 ZNF440Q8IYI8 595 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 OR52P1PQ8NH57 321 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 CNOT9Q92600 299 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 GTF2H4Q92759 462 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 SPDL1Q96EA4 605 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 PIK3IP1Q96FE7 263 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 AURKBQ96GD4 344 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 ALPK1Q96QP1 1244 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 SMR3AQ99954 134 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 PSD2Q9BQI7 771 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 OR10A4Q9H209 315 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 PLEKHF2Q9H8W4 249 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 BCO1Q9HAY6 547 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 CCDC167Q9P0B6 97 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 HDGFL3Q9Y3E1 203 aa10.14□□□□□ -0.79
NUDCD3-206ENST00000475952 A0A096LPI6 279 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 KIAA1324LA8MWY0 1029 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 DEFB108AA8MXU0 73 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 CLIC1O00299 241 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 FAAHO00519 579 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 AP3D1O14617 1153 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 SMAD9O15198 467 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 DNPH1O43598 174 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ATE1O95260 518 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 PMS2P2O95744 297 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 THBS1P07996 1170 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 TFPTP0C1Z6 253 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 PSMB1P20618 241 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ATP4BP51164 291 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 POLR2HP52434 150 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 MAP2K6P52564 334 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 COPZ1P61923 177 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ADAM8P78325 824 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 SQLEQ14534 574 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 LARS2Q15031 903 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 RNF220Q5VTB9 566 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ANKRD34AQ69YU3 496 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 BLOC1S3Q6QNY0 202 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 TFAP2EQ6VUC0 442 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 STAC2Q6ZMT1 411 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ZNF836Q6ZNA1 936 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 NUFIP2Q7Z417 695 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 BIVMQ86UB2 503 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 PRIMA1Q86XR5 153 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 SLC38A5Q8WUX1 472 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 CKAP2Q8WWK9 683 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 DDIT4LQ96D03 193 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 MBD6Q96DN6 1003 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 TMEM19Q96HH6 336 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 SIKE1Q9BRV8 207 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ACTR6Q9GZN1 396 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 PAIP1Q9H074 479 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 RABEP2Q9H5N1 569 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ARMC7Q9H6L4 198 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 TMEM45AQ9NWC5 275 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 EMC3Q9P0I2 261 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 ZNF443Q9Y2A4 671 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 GPR52Q9Y2T5 361 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 PCDHB14Q9Y5E9 798 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 CUBNO60494 3623 aa10.13□□□□□ -0.79
NUDCD3-206ENST00000475952 TMED7-TICAM2A0A0A6YYA0 188 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 A0A0G2JPF8 293 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 CDHR4A6H8M9 788 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 ZNF724A8MTY0 619 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 HNRNPCL2B2RXH8 293 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 HNRNPCL3B7ZW38 293 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 C5orf58C9J3I9 102 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 ZNF208O43345 1280 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 HNRNPCL1O60812 293 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 ADAM11O75078 769 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 HNRNPCL4P0DMR1 293 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 PPIBP23284 216 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 IL32P24001 234 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 SLC1A3P43003 542 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 NR1H2P55055 460 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 EPS8Q12929 822 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 RGNQ15493 299 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 MAPK11Q15759 364 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 DEFB113Q30KQ7 82 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 BEX5Q5H9J7 111 aa10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 RPS26P11Q5JNZ5 115 aaPredicted RBP10.12□□□□□ -0.79
NUDCD3-206ENST00000475952 LRIF1Q5T3J3 769 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms