RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 Q7L0L9 218 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 PIGCQ92535 297 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 MYLPFQ96A32 169 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 PTGES2Q9H7Z7 377 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 RPRD1BQ9NQG5 326 aaKnown RBP4.21□□□□□ -1.74
SMC5-203ENST00000475540 UTP6Q9NYH9 597 aaKnown RBP4.21□□□□□ -1.74
SMC5-203ENST00000475540 PIPOXQ9P0Z9 390 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 SUN2Q9UH99 717 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 LCMT1Q9UIC8 334 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 NAP1L2Q9ULW6 460 aaPredicted RBP4.21□□□□□ -1.74
SMC5-203ENST00000475540 L3MBTL1Q9Y468 752 aa4.21□□□□□ -1.74
SMC5-203ENST00000475540 HEATR9A2RTY3 570 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 PANO1I0J062 215 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 WRBO00258 174 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 PES1O00541 588 aaKnown RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 PPIHO43447 177 aaKnown RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 SSR1P43307 286 aaKnown RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 PLA2G16P53816 162 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 GANABQ14697 944 aaKnown RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 UBE2V2Q15819 145 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 IL17AQ16552 155 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 HADHQ16836 314 aaKnown RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 TEX44Q53QW1 395 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 BTNL3Q6UXE8 466 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 ZNF562Q6V9R5 426 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 TMEM184AQ6ZMB5 413 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 FRA10AC1Q70Z53 315 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 OTUD6AQ7L8S5 288 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 NLRP9Q7RTR0 991 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 PAQR7Q86WK9 346 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 SPATA4Q8NEY3 305 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 ANKRD49Q8WVL7 239 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 PEX13Q92968 403 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 ELMO2Q96JJ3 720 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 RPRD1AQ96P16 312 aaPredicted RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 TGM7Q96PF1 710 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 ZNF184Q99676 751 aaPredicted RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 NICN1Q9BSH3 213 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 CNPY3Q9BT09 278 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 NUP58Q9BVL2 599 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 POLR3FQ9H1D9 316 aaPredicted RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 PNO1Q9NRX1 252 aaKnown RBP4.2□□□□□ -1.74
SMC5-203ENST00000475540 PIGLQ9Y2B2 252 aa4.2□□□□□ -1.74
SMC5-203ENST00000475540 LRRK1Q38SD2 2015 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 METP08581 1390 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 FBLL1A6NHQ2 334 aaKnown RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 BTN3A3O00478 584 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 TM9SF1O15321 606 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 STX7O15400 261 aaKnown RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 DUX1O43812 170 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 ZNF861PO60384 105 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 CTAG2O75638 210 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 TROVE2P10155 538 aaKnown RBP eCLIP4.19□□□□□ -1.74
SMC5-203ENST00000475540 FUT3P21217 361 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 SYKP43405 635 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 IL18Q14116 193 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 ELAVL3Q14576 367 aaKnown RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 CCDC14Q49A88 953 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 C10orf120Q5SQS8 335 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 HSD17B13Q7Z5P4 300 aaPredicted RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 TMCO2Q7Z6W1 182 aaPredicted RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 BIVMQ86UB2 503 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 ECHDC2Q86YB7 292 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 LRRC43Q8N309 656 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 RPL3LQ92901 407 aaKnown RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 SH3YL1Q96HL8 342 aaPredicted RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 C7orf34Q96L11 122 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 CCNL2Q96S94 520 aaPredicted RBP4.19□□□□□ -1.74
SMC5-203ENST00000475540 CHRDL1Q9BU40 450 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 UFSP2Q9NUQ7 469 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 ONECUT1Q9UBC0 465 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 KIAA1257Q9ULG3 409 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 IFT52Q9Y366 437 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 NOTCH2Q04721 2471 aa4.19□□□□□ -1.74
SMC5-203ENST00000475540 PNPLA6Q8IY17 1366 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 MEGF6O75095 1541 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 A0A1W2PNV4 684 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 TBL1XO60907 577 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 LYPLA1O75608 230 aaPredicted RBP4.18□□□□□ -1.74
SMC5-203ENST00000475540 CABYRO75952 493 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 OPN1LWP04000 364 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 POLR2MP0CAP2 368 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 STAG3L3P0CL85 134 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 ZNF17P17021 662 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 TPSB2P20231 275 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 GABRR1P24046 479 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 CCT3P49368 545 aaKnown RBP4.18□□□□□ -1.74
SMC5-203ENST00000475540 OC90Q02509 493 aaPredicted RBP4.18□□□□□ -1.74
SMC5-203ENST00000475540 PLOD1Q02809 727 aaPredicted RBP4.18□□□□□ -1.74
SMC5-203ENST00000475540 TFDP1Q14186 410 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 WDR43Q15061 677 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMC5-203ENST00000475540 TPSAB1Q15661 275 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 MAPK6Q16659 721 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 SPANXN2Q5MJ10 180 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 CTSL3PQ5NE16 218 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 DCST2Q5T1A1 773 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 C16orf87Q6PH81 154 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 TIFABQ6ZNK6 161 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 MKXQ8IYA7 352 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 SLC38A6Q8IZM9 456 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms