RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 EPORP19235 508 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 CALCRP30988 508 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 GPC1P35052 558 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 CRYBB2P43320 205 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 MAGEA6P43360 314 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 SH3BGRP55822 239 aaPredicted RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 SELENOVP59797 346 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 TRA2BP62995 288 aaKnown RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 HGFACQ04756 655 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 GRAMD1BQ3KR37 738 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 TBRG1Q3YBR2 411 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 GLE1Q53GS7 698 aaKnown RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 DMRTC1Q5HYR2 192 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 AVPI1Q5T686 147 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 C9orf135Q5VTT2 229 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 MTDHQ86UE4 582 aaKnown RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 MMGT1Q8N4V1 131 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 ZSCAN4Q8NAM6 433 aaPredicted RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 SPC24Q8NBT2 197 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 CPEB3Q8NE35 698 aaKnown RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 OR7G2Q8NG99 324 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 OR4F17Q8NGA8 305 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 FBXO27Q8NI29 283 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 UPRTQ96BW1 309 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 LRRC39Q96DD0 335 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 KTI12Q96EK9 354 aaPredicted RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 CNRIP1Q96F85 164 aaPredicted RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 ZNF681Q96N22 645 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 OR5B2Q96R09 309 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 OR4F4Q96R69 305 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 DIRC2Q96SL1 478 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 NPAS1Q99742 590 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 CD244Q9BZW8 370 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 DERL2Q9GZP9 239 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 MARCH7Q9H992 704 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 NKIRAS2Q9NYR9 191 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 CD274Q9NZQ7 290 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 KIF17Q9P2E2 1029 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 LEF1Q9UJU2 399 aaPredicted RBP6.83□□□□□ -1.32
USP54-211ENST00000474929 TFR2Q9UP52 801 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 LYSTQ99698 3801 aa6.83□□□□□ -1.32
USP54-211ENST00000474929 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 DSPPQ9NZW4 1301 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 IGHV2OR16-5A0A0B4J2B6 119 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 A0A1W2PNR3 127 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 A0A1W2PPW3 197 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 SLC22A23A1A5C7 686 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 ISPDA4D126 451 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 ZNF716A6NP11 495 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 A8MXK9 166 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 H3BNH8 94 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 SULT2B1O00204 365 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 GPR137BO60478 399 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 DUS4LO95620 317 aaKnown RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 MT-ND5P03915 603 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 KLK1P06870 262 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 ZSCAN5DPP0CG00 497 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 LYL1P12980 280 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 PGAM1P18669 254 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 FKBP2P26885 142 aaKnown RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 MPIP34949 423 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 ARR3P36575 388 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 ALDH9A1P49189 494 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 DIO1P49895 249 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 ATP6V0D1P61421 351 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 CRYMQ14894 314 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 DEFB112Q30KQ8 113 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 HIKESHIQ53FT3 197 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 GPR157Q5UAW9 335 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 DHRS7BQ6IAN0 325 aaPredicted RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 TMEM154Q6P9G4 183 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 DRICH1Q6PGQ1 229 aaPredicted RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 LRRN1Q6UXK5 716 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 SYCE1Q8N0S2 351 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 SPICQ8N5J4 248 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 SPERTQ8NA61 448 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 ZNF527Q8NB42 609 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 OR9A2Q8NGT5 310 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 UBTD2Q8WUN7 234 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 JADE3Q92613 823 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 SH3YL1Q96HL8 342 aaPredicted RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 NAT9Q9BTE0 207 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 MRPL37Q9BZE1 423 aaKnown RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 GPR61Q9BZJ8 451 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 NOX3Q9HBY0 568 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 PPANQ9NQ55 473 aaKnown RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 UBQLN4Q9NRR5 601 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 TNFRSF19Q9NS68 423 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 SIRT3Q9NTG7 399 aaPredicted RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 DDX18Q9NVP1 670 aaKnown RBP6.82□□□□□ -1.32
USP54-211ENST00000474929 ANGPTL3Q9Y5C1 460 aa6.82□□□□□ -1.32
USP54-211ENST00000474929 HMX2A2RU54 273 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 ZNF587BE7ETH6 402 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 KRT33AO76009 404 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 NCR1O76036 304 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 ESRRBO95718 433 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 IFI6P09912 130 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 IGHV4-38-2P0DP08 117 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 PRKCAP17252 672 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms