RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 APEHP13798 732 aaKnown RBP8.98□□□□□ -0.97
USP39-214ENST00000474572 ALAS2P22557 587 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 MST1P26927 711 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 NOS3P29474 1203 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 CAPZA2P47755 286 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 SLC6A8P48029 635 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 PNLIPRP2P54317 469 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 FABP5Q01469 135 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ACY1Q03154 408 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ATP1A4Q13733 1029 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 NR0B2Q15466 257 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.98□□□□□ -0.97
USP39-214ENST00000474572 ZNF791Q3KP31 576 aaPredicted RBP8.98□□□□□ -0.97
USP39-214ENST00000474572 VWA2Q5GFL6 755 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 PERM1Q5SV97 790 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 SLC35F1Q5T1Q4 408 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ZNF574Q6ZN55 896 aaPredicted RBP8.98□□□□□ -0.97
USP39-214ENST00000474572 DPY19L2P2Q6ZN68 376 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 PLEKHG7Q6ZR37 379 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 LSRQ86X29 649 aaPredicted RBP8.98□□□□□ -0.97
USP39-214ENST00000474572 LYSMD2Q8IV50 215 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 PARP16Q8N5Y8 322 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 TMEM99Q8N816 258 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 Q8N9G6 341 aaPredicted RBP8.98□□□□□ -0.97
USP39-214ENST00000474572 LRRC75AQ8NAA5 344 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 OR51G2Q8NGK0 314 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 OR1N1Q8NGS0 311 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 OR51A7Q8NH64 312 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 DPYSL5Q9BPU6 564 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ALG8Q9BVK2 526 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 SEMA4CQ9C0C4 833 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 OR8D2Q9GZM6 311 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 VN1R1Q9GZP7 353 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 WWTR1Q9GZV5 400 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ADAM19Q9H013 955 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 NUAK2Q9H093 628 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 MED20Q9H944 212 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ADGRL4Q9HBW9 690 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 NRIP3Q9NQ35 241 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 DAPK2Q9UIK4 370 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 PPIEQ9UNP9 301 aaKnown RBP8.98□□□□□ -0.97
USP39-214ENST00000474572 HIF3AQ9Y2N7 669 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 ZNF337Q9Y3M9 751 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 CLCA3PQ9Y6N3 262 aa8.98□□□□□ -0.97
USP39-214ENST00000474572 A0A1W2PQM1 296 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ZC3H12DA2A288 527 aaKnown RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 FUOMA2VDF0 154 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 A8MUA0 341 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ALG1L2C9J202 215 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 MCIDASD6RGH6 385 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 CTDSP2O14595 271 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 IMPA2O14732 288 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 IDH3BO43837 385 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 EIF4E2O60573 245 aaKnown RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 PFDN1O60925 122 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 CDRT1O95170 752 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 TXNDC12O95881 172 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 DHPSP49366 369 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 PRPS1P60891 318 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ACTC1P68032 377 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ACTA1P68133 377 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ZNF85Q03923 595 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 CDC20Q12834 499 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 IL10RAQ13651 578 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ZNF74Q16587 644 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 CLPPQ16740 277 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 TRIM16LQ309B1 348 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 CRTC2Q53ET0 693 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 SLC35D3Q5M8T2 416 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 SNAP47Q5SQN1 464 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ZNF385CQ66K41 422 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 C22orf42Q6IC83 251 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 GUSBP11Q6P575 273 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 TSSK4Q6SA08 328 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 CBLN3Q6UW01 205 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 TMPRSS11AQ6ZMR5 421 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 SNX29P2Q8IUI4 249 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 DRAXINQ8NBI3 349 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 ATP6V1C2Q8NEY4 427 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 OR4D9Q8NGE8 314 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 OR5M3Q8NGP4 307 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 PHOSPHO1Q8TCT1 267 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 RNF138Q8WVD3 245 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ASB15Q8WXK1 588 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ERMAPQ96PL5 475 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 SDHCQ99643 169 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 CCDC32Q9BV29 185 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 YIPF2Q9BWQ6 316 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 NMNAT2Q9BZQ4 307 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 SP140LQ9H930 580 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 PRDM6Q9NQX0 595 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 BABAM2Q9NXR7 383 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 PLEKHB1Q9UF11 243 aaPredicted RBP8.97□□□□□ -0.97
USP39-214ENST00000474572 GSTK1Q9Y2Q3 226 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 SLC6A5Q9Y345 797 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 NOX1Q9Y5S8 564 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 ADAMTS9Q9P2N4 1935 aa8.97□□□□□ -0.97
USP39-214ENST00000474572 CPAMD8Q8IZJ3 1885 aa8.96□□□□□ -0.97
USP39-214ENST00000474572 A8MU76 341 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms