RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 KRT75O95678 551 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 IL6P05231 212 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 UQCRBP14927 111 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 WDR4P57081 412 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 LRRC74BQ6ZQY2 392 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 PIGXQ8TBF5 258 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 PIWIL2Q8TC59 973 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 FBXW5Q969U6 566 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 MUCL1Q96DR8 90 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 PRSS50Q9UI38 385 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 PRDM4Q9UKN5 801 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 PRAMEF27A3QJZ7 478 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 C9JVG2 144 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 CLOCKO15516 846 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 BCAS1O75363 584 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 LYZL6O75951 148 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 NR2F1P10589 423 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 IDO1P14902 403 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 COX5AP20674 150 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 EPHA3P29320 983 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 IL12AP29459 219 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 IDH2P48735 452 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 MAP2K6P52564 334 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 ATP5J2P56134 94 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 RPS4XP62701 263 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 SYPL1Q16563 259 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 TIMM23BQ5SRD1 257 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 Q71RC1 249 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 ANKFN1Q8N957 763 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF775Q96BV0 537 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 INPP5KQ9BT40 448 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 SLC38A1Q9H2H9 487 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 WDR55Q9H6Y2 383 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 NKIRAS1Q9NYS0 192 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 LAMP3Q9UQV4 416 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 TRAPPC4Q9Y296 219 aa18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 NOSIPQ9Y314 301 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-206ENST00000474421 CADP27708 2225 aa18.02■□□□□ 0.47
PDLIM4-206ENST00000474421 GOLGA8QA0A0J9YX86 632 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 GOLGA8OA6NCC3 632 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 GOLGA8NF8WBI6 632 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 FAAHO00519 579 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 RFXANKO14593 260 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 DBIP07108 87 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 CHRM4P08173 479 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 IL7RP16871 459 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 GGT1P19440 569 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 POLR2HP52434 150 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 PPA1Q15181 289 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 STK11Q15831 433 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 PDCD4Q53EL6 469 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 NXNQ6DKJ4 435 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 ADGRG3Q86Y34 549 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 CIARTQ8N365 385 aaPredicted RBP18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 MGARPQ8TDB4 240 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 WDR60Q8WVS4 1066 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 CNOT9Q92600 299 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 ZBTB9Q96C00 473 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 DDIT4LQ96D03 193 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 TMEM181Q9P2C4 612 aa18.01■□□□□ 0.47
PDLIM4-206ENST00000474421 TRIM64A6NGJ6 449 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 TRIM64BA6NI03 449 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 CLDN24A6NM45 220 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 ZNF208O43345 1280 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 EIF1BO60739 113 aaKnown RBP18■□□□□ 0.47
PDLIM4-206ENST00000474421 SLC22A3O75751 556 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 LY6G6DO95868 133 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 GSNP06396 782 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 KITP10721 976 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 RPS4Y1P22090 263 aaKnown RBP18■□□□□ 0.47
PDLIM4-206ENST00000474421 IGHV1-2P23083 117 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 CDKN2CP42773 168 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 SLC16A1P53985 500 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 BSPH1Q075Z2 132 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 ETFDHQ16134 617 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 GSTA3Q16772 222 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 ZNF672Q499Z4 452 aaPredicted RBP18■□□□□ 0.47
PDLIM4-206ENST00000474421 FBXW9Q5XUX1 488 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 DNAJC14Q6Y2X3 702 aaPredicted RBP18■□□□□ 0.47
PDLIM4-206ENST00000474421 HMGN2P46Q86SG4 172 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 PEX5LQ8IYB4 626 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 ZNF440Q8IYI8 595 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 UBE2J2Q8N2K1 259 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 APH1AQ96BI3 265 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 TRMT61AQ96FX7 289 aaKnown RBP18■□□□□ 0.47
PDLIM4-206ENST00000474421 ARL5BQ96KC2 179 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 MANSC1Q9H8J5 431 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 CALML5Q9NZT1 146 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 P2RX2Q9UBL9 471 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 ABCA2Q9BZC7 2435 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 TLN2Q9Y4G6 2542 aa18■□□□□ 0.47
PDLIM4-206ENST00000474421 TMED7-TICAM2A0A0A6YYA0 188 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 CFAP73A6NFT4 308 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 ZNF716A6NP11 495 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 SMAD7O15105 426 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 PGM3O95394 542 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 SLC1A3P43003 542 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 OR2B6P58173 313 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 SLC35A1P78382 337 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 PLAURQ03405 335 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms