RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	AKR1E2	Q96JD6	320 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SERAC1	Q96JX3	654 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	NOL4L	Q96MY1	436 aa	Predicted RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ZIM3	Q96PE6	472 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	LCE3D	Q9BYE3	92 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	CDHR2	Q9BYE9	1310 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	PARD6B	Q9BYG5	372 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	PEAK1	Q9H792	1746 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	COG4	Q9H9E3	785 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	MEAF6	Q9HAF1	191 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	VNN3	Q9NY84	501 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	MRPL39	Q9NYK5	338 aa	Known RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	DIP2B	Q9P265	1576 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	XPO7	Q9UIA9	1087 aa	Known RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF256	Q9Y2P7	627 aa	Predicted RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	AP1M2	Q9Y6Q5	423 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	DLG5	Q8TDM6	1919 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CRYBG1	Q9Y4K1	1723 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	TOPAZ1	Q8N9V7	1692 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	LRRC37A3	O60309	1634 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF609	O15014	1411 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	PPIAL4C	A0A0B4J2A2	164 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272		A0A1B0GWJ7	208 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272		E9PLD3	99 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272		K7ENP7	123 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	B3GAT3	O94766	335 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	UFL1	O94874	794 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	DEXI	O95424	95 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	GUCA1C	O95843	209 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	F10	P00742	488 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	MMP1	P03956	469 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CSF2	P04141	144 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	ASNS	P08243	561 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272		P0C879	139 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	PPIAL4G	P0DN37	164 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CALM1	P0DP23	149 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CALM2	P0DP24	149 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CALM3	P0DP25	149 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	PDHB	P11177	359 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	DES	P17661	470 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	ATP5A1	P25705	553 aa	Known RBP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	KIF5B	P33176	963 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	STAR	P49675	285 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	NTHL1	P78549	312 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	IGLV3-21	P80748	117 aa	Predicted RBP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	VLDLR	P98155	873 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	BDH1	Q02338	343 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	KLHL30	Q0D2K2	578 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	ST3GAL3	Q11203	375 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	SLC39A6	Q13433	755 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CAPRIN1	Q14444	709 aa	Known RBP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	WHAMMP3	Q1A5X7	153 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	TIGIT	Q495A1	244 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	USH1G	Q495M9	461 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	SBK1	Q52WX2	424 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	DNAJC21	Q5F1R6	531 aa	Known RBP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	FHL5	Q5TD97	284 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	OR8G2P	Q6IF36	304 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	GALNT17	Q6IS24	598 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	ACSM5	Q6NUN0	579 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	ARMCX2	Q7L311	632 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	LRRC70	Q7Z2Q7	622 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	TMEM17	Q86X19	198 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	FBXO16	Q8IX29	292 aa	Predicted RBP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	OR10T2	Q8NGX3	314 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	OSTF1	Q92882	214 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	FAF2	Q96CS3	445 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	SDSL	Q96GA7	329 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	TCEANC2	Q96MN5	208 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	TSGA13	Q96PP4	275 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	MYCBP	Q99417	103 aa	Predicted RBP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	KIR2DL4	Q99706	377 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	NUP58	Q9BVL2	599 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	C19orf24	Q9BVV8	132 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	FAM107B	Q9H098	131 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	MED4	Q9NPJ6	270 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	RMND1	Q9NWS8	449 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	AATF	Q9NY61	560 aa	Known RBP eCLIP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	SPRR3	Q9UBC9	169 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	RNF14	Q9UBS8	474 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CHRNA9	Q9UGM1	479 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	APOBEC3B	Q9UH17	382 aa	Known RBP	2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	CRLS1	Q9UJA2	301 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	FLVCR1	Q9Y5Y0	555 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	SPACA6	W5XKT8	324 aa		2.54	□□□□□ -2
TMEM50B-208	ENST00000474272	PHRF1	Q9P1Y6	1649 aa	Known RBP	2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	SLIT3	O75094	1523 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	CPD	O75976	1380 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	MROH5	Q6ZUA9	1318 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	IGLV8-61	A0A075B6I0	122 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	ERICH2	A1L162	156 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	LAD1	O00515	517 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	MAPK13	O15264	365 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	POLR2D	O15514	142 aa	Known RBP	2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	PEX11A	O75192	247 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF254	O75437	659 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	GPX5	O75715	221 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	TM7SF2	O76062	418 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	PCCB	P05166	539 aa		2.53	□□□□□ -2
TMEM50B-208	ENST00000474272	HBQ1	P09105	142 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms