RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 BCO1Q9HAY6 547 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 GP6Q9HCN6 339 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 SLC25A37Q9NYZ2 338 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 KLHL9Q9P2J3 617 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF443Q9Y2A4 671 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-203ENST00000474056 TMED7-TICAM2A0A0A6YYA0 188 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 TMEM72A0PK05 275 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 FAAHO00519 579 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 GCM2O75603 506 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-203ENST00000474056 ATE1O95260 518 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 RAF1P04049 648 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 THBDP07204 575 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 ATP4BP51164 291 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 CSNK2A1P68400 391 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-203ENST00000474056 RASGEF1BQ0VAM2 473 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 SQLEQ14534 574 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 AGKQ53H12 422 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 ABLIM2Q6H8Q1 611 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 MAL2Q969L2 176 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 FOXC2Q99958 501 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 CXXC4Q9H2H0 198 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 RAD21L1Q9H4I0 556 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 FANCFQ9NPI8 374 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 THUMPD1Q9NXG2 353 aaKnown RBP15.94■□□□□ 0.14
UPF3A-203ENST00000474056 OSGIN1Q9UJX0 560 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 TMED7Q9Y3B3 224 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 CHST2Q9Y4C5 530 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 ARID1AO14497 2285 aa15.94■□□□□ 0.14
UPF3A-203ENST00000474056 CDHR4A6H8M9 788 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 CFAP73A6NFT4 308 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 EDF1O60869 148 aaKnown RBP15.93■□□□□ 0.14
UPF3A-203ENST00000474056 PMS2P2O95744 297 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 BMP2P12643 396 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 PSMB1P20618 241 aaKnown RBP15.93■□□□□ 0.14
UPF3A-203ENST00000474056 EDNRAP25101 427 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 LOXP28300 417 aaPredicted RBP15.93■□□□□ 0.14
UPF3A-203ENST00000474056 TACR3P29371 465 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 SLC1A3P43003 542 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 HTR3AP46098 478 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 FADDQ13158 208 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 KEAP1Q14145 624 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 TSC22D1Q15714 1073 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.93■□□□□ 0.14
UPF3A-203ENST00000474056 CXorf67Q86X51 503 aaPredicted RBP15.93■□□□□ 0.14
UPF3A-203ENST00000474056 GABRG1Q8N1C3 465 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 C10orf111Q8N326 155 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF775Q96BV0 537 aaPredicted RBP15.93■□□□□ 0.14
UPF3A-203ENST00000474056 HS3ST6Q96QI5 342 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 TACO1Q9BSH4 297 aaKnown RBP15.93■□□□□ 0.14
UPF3A-203ENST00000474056 ACTR6Q9GZN1 396 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 VAPAQ9P0L0 249 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 HDGFL3Q9Y3E1 203 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 ITPR3Q14573 2671 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 VPS13CQ709C8 3753 aa15.93■□□□□ 0.14
UPF3A-203ENST00000474056 A0A0G2JPF8 293 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 TMEM247A6NEH6 219 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 HNRNPCL2B2RXH8 293 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 HNRNPCL3B7ZW38 293 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 HNRNPCL1O60812 293 aaKnown RBP15.92■□□□□ 0.14
UPF3A-203ENST00000474056 HNRNPCL4P0DMR1 293 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 PPP3CBP16298 524 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 ACAA2P42765 397 aaKnown RBP15.92■□□□□ 0.14
UPF3A-203ENST00000474056 POLR2HP52434 150 aaKnown RBP15.92■□□□□ 0.14
UPF3A-203ENST00000474056 RNF220Q5VTB9 566 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 MTDHQ86UE4 582 aaKnown RBP15.92■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF440Q8IYI8 595 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 CLIP4Q8N3C7 705 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 STON2Q8WXE9 905 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 NPHS2Q9NP85 383 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 A4GALTQ9NPC4 353 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 PRSS50Q9UI38 385 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 DCTN4Q9UJW0 460 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 EDARQ9UNE0 448 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 GPR52Q9Y2T5 361 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 CADP27708 2225 aa15.92■□□□□ 0.14
UPF3A-203ENST00000474056 TRBV5-3A0A0A0MS03 114 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 ZC3H12DA2A288 527 aaKnown RBP15.91■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF724A8MTY0 619 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF814B7Z6K7 855 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 THBS1P07996 1170 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 IMPDH2P12268 514 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 UQCRBP14927 111 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 NCF2P19878 526 aaPredicted RBP15.91■□□□□ 0.14
UPF3A-203ENST00000474056 OR3A2P47893 321 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 CLK1P49759 484 aaKnown RBP15.91■□□□□ 0.14
UPF3A-203ENST00000474056 LARS2Q15031 903 aaKnown RBP15.91■□□□□ 0.14
UPF3A-203ENST00000474056 BBS10Q8TAM1 723 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 S100PBPQ96BU1 408 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 DDIT4LQ96D03 193 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 MBD6Q96DN6 1003 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 ALPK1Q96QP1 1244 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 ADAM19Q9H013 955 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 OR10A4Q9H209 315 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 IKZF5Q9H5V7 419 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF385DQ9H6B1 395 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 BCL2L10Q9HD36 194 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 TMEM45AQ9NWC5 275 aa15.91■□□□□ 0.14
UPF3A-203ENST00000474056 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.9■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF716A6NP11 495 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF208O43345 1280 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms