RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CAPGP40121 348 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PTGDSP41222 190 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 GPR4P46093 362 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 MEOX1P50221 254 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 DAPP51397 102 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 RPS6KA3P51812 740 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 CDC42P60953 191 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ESRRGP62508 458 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 CXADRP78310 365 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PLAURQ03405 335 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 TLE3Q04726 772 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 TSPAN31Q12999 210 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 SELENBP1Q13228 472 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 MFSD13AQ14CX5 517 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 SEC23BQ15437 767 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PLPPR5Q32ZL2 321 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 KDM4DQ6B0I6 523 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 C1orf94Q6P1W5 598 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PGBD2Q6P3X8 592 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 INO80CQ6PI98 192 aaPredicted RBP9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 TBPL2Q6SJ96 375 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ARSKQ6UWY0 536 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 GALNTL5Q7Z4T8 443 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 NANOGNBQ7Z5D8 188 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ATG4DQ86TL0 474 aaPredicted RBP9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 OAFQ86UD1 273 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 FADS6Q8N9I5 356 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 FANK1Q8TC84 345 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 STK35Q8TDR2 534 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 OSTF1Q92882 214 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 GATA6Q92908 595 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PLEKHA8Q96JA3 519 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 FRMD6Q96NE9 622 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 GNRHR2Q96P88 292 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 SIGLEC12Q96PQ1 595 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ASPNQ9BXN1 380 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 RSPO3Q9BXY4 272 aaPredicted RBP9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 RTN4RQ9BZR6 473 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 TOR3AQ9H497 397 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 SH2D2AQ9NP31 389 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 TUBA8Q9NY65 449 aaPredicted RBP9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 OSGIN1Q9UJX0 560 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 FBXL2Q9UKC9 423 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 RPH3AQ9Y2J0 694 aaPredicted RBP9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 C15orf41Q9Y2V0 281 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PCDHGB7Q9Y5F8 929 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PCDHGA9Q9Y5G4 932 aaKnown RBP9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 GMPPBQ9Y5P6 360 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 AP4B1Q9Y6B7 739 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 TRAV36DV7A0A075B6V5 113 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 H0YAE9 185 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 TFECO14948 347 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 ADAM11O75078 769 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 TRIM3O75382 744 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 MT-ATP6P00846 226 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 CAPNS1P04632 268 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 OSMP13725 252 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 IDUAP35475 653 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC9A3P48764 834 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 TNFSF10P50591 281 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 PRKCDQ05655 676 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 NPRL3Q12980 569 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 TOMM34Q15785 309 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 GLYR1Q49A26 553 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 PDSS1Q5T2R2 415 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 C6orf52Q5T4I8 152 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 CASP12Q6UXS9 341 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 MAMDC2Q7Z304 686 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 SULF2Q8IWU5 870 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 C8orf59Q8N0T1 100 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 DEPDC4Q8N2C3 294 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 PARP8Q8N3A8 854 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 WDSUB1Q8N9V3 476 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 MDS2Q8NDY4 140 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 PFN4Q8NHR9 129 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 SMPDL3BQ92485 455 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 ZHX1-C8orf76Q96EF9 292 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 CNBD2Q96M20 576 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 SFXN2Q96NB2 322 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF570Q96NI8 536 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC38A2Q96QD8 506 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 SMAD5Q99717 465 aaKnown RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 BARD1Q99728 777 aaKnown RBP9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 NIPSNAP1Q9BPW8 284 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 PRSS27Q9BQR3 290 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 ADAM19Q9H013 955 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 LDAHQ9H6V9 325 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 NANSQ9NR45 359 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 LRCH1Q9Y2L9 728 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF337Q9Y3M9 751 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 HEATR5AQ86XA9 2040 aa9.32□□□□□ -0.92
PRPF38A-202ENST00000474048 C17orf51A8MQB3 221 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 FAM166BA8MTA8 275 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 H3BML4 177 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 LINC01387J3KSC0 135 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF208O43345 1280 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 CEACAM4O75871 244 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 SOX14O95416 240 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 CH25HO95992 272 aa9.31□□□□□ -0.92
PRPF38A-202ENST00000474048 THY1P04216 161 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms