RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 A0A1W2PQD3 144 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 OR6C70A6NIJ9 312 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 HCN1O60741 890 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 CSO75390 466 aaKnown RBP16.42■□□□□ 0.22
VARS2-206ENST00000473916 PPM1BO75688 479 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 GADD45AP24522 165 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 TACR3P29371 465 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 MTNR1AP48039 350 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 NRG3P56975 720 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 INSM1Q01101 510 aaPredicted RBP16.42■□□□□ 0.22
VARS2-206ENST00000473916 FOXK2Q01167 660 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 NCF4Q15080 339 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 ZNF517Q6ZMY9 492 aaPredicted RBP16.42■□□□□ 0.22
VARS2-206ENST00000473916 CYP4Z2PQ8N1L4 340 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 NUBPLQ8TB37 319 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 OIT3Q8WWZ8 545 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 MOGAT1Q96PD6 335 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 EDEM2Q9BV94 578 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 SDK2Q58EX2 2172 aa16.42■□□□□ 0.22
VARS2-206ENST00000473916 MCIDASD6RGH6 385 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 NUDT14O95848 222 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 HMGN1P05114 100 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 NOS3P29474 1203 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 LCN1P31025 176 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 CD79BP40259 229 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 SPEM2Q0P670 501 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 SOWAHCQ53LP3 525 aaPredicted RBP16.41■□□□□ 0.22
VARS2-206ENST00000473916 ZNF362Q5T0B9 420 aaPredicted RBP16.41■□□□□ 0.22
VARS2-206ENST00000473916 CXXC5Q7LFL8 322 aaKnown RBP16.41■□□□□ 0.22
VARS2-206ENST00000473916 ZNF367Q7RTV3 350 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 OR4F15Q8NGB8 312 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 DUSP19Q8WTR2 217 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 NACC2Q96BF6 587 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 A0A1W2PNU3 283 aaPredicted RBP16.41■□□□□ 0.22
VARS2-206ENST00000473916 OR2J2O76002 312 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 SLC1A3P43003 542 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 CYB561A3Q8NBI2 242 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 C9orf43Q8TAL5 461 aaPredicted RBP16.41■□□□□ 0.22
VARS2-206ENST00000473916 CRELD1Q96HD1 420 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 LRFN5Q96NI6 719 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 TEX12Q9BXU0 123 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 MED17Q9NVC6 651 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 C19orf25Q9UFG5 118 aaPredicted RBP16.41■□□□□ 0.22
VARS2-206ENST00000473916 PISDQ9UG56 409 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 FBXL4Q9UKA2 621 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 DIMT1Q9UNQ2 313 aaKnown RBP16.41■□□□□ 0.22
VARS2-206ENST00000473916 ADAM18Q9Y3Q7 739 aa16.41■□□□□ 0.22
VARS2-206ENST00000473916 B4E171 279 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 CDC40O60508 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
VARS2-206ENST00000473916 OR7A10O76100 309 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 STK17BO94768 372 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 RAB36O95755 333 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 ZNF806P0C7X5 589 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 CLUP10909 449 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 SOX3P41225 446 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 TSPAN7P41732 249 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 RPS18P62269 152 aaKnown RBP16.4■□□□□ 0.22
VARS2-206ENST00000473916 LTBQ06643 244 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 TSTQ16762 297 aaKnown RBP16.4■□□□□ 0.22
VARS2-206ENST00000473916 BTBD16Q32M84 506 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 RPL13AP3Q6NVV1 102 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 HGDQ93099 445 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 KTI12Q96EK9 354 aaPredicted RBP16.4■□□□□ 0.22
VARS2-206ENST00000473916 OPALINQ96PE5 141 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 MGLLQ99685 303 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 NPAS1Q99742 590 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 ADAM19Q9H013 955 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 RNF167Q9H6Y7 350 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 HS3ST3B1Q9Y662 390 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 OTOGLQ3ZCN5 2332 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 PCNX2A6NKB5 2137 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 C9J4A7 227 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 PNMTP11086 282 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 RGS6P49758 472 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 SSX1Q16384 188 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 OR2G6Q5TZ20 316 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 NXNL2Q5VZ03 156 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 NIPAL3Q6P499 406 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 NANOGP1Q8N7R0 232 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 OR5W2Q8NH69 310 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 MOSPD2Q8NHP6 518 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 PTP4A1Q93096 173 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 OR51E2Q9H255 320 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 CMC2Q9NRP2 79 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 MRPS18AQ9NVS2 196 aaKnown RBP16.4■□□□□ 0.22
VARS2-206ENST00000473916 MYOTQ9UBF9 498 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 OSGIN1Q9UJX0 560 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 NXT1Q9UKK6 140 aaKnown RBP16.4■□□□□ 0.22
VARS2-206ENST00000473916 ERGIC3Q9Y282 383 aa16.4■□□□□ 0.22
VARS2-206ENST00000473916 LOC102723996A0A087X1L8 192 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 IGHV1-45A0A0A0MS14 117 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 C4orf47A7E2U8 309 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 COX6A1P12074 109 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 RAB40BQ12829 278 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 CRMP1Q14194 572 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 DCAF12Q5T6F0 453 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 C1QL3Q5VWW1 255 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 LYPD8Q6UX82 237 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 RTL4Q6ZR62 310 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 RAB11FIP2Q7L804 512 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms