RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 MPP2Q14168 576 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ZSWIM7Q19AV6 140 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 TSPO2Q5TGU0 170 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 FAM166AQ6J272 317 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ZCCHC12Q6PEW1 402 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 TMEM108Q6UXF1 575 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 LINGO2Q7L985 606 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 P2RY8Q86VZ1 359 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 MEX3DQ86XN8 651 aaKnown RBP8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF100Q8IYN0 542 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ZCCHC24Q8N2G6 241 aaKnown RBP8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ARFGAP2Q8N6H7 521 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 KRTCAP2Q8N6L1 136 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF614Q8N883 585 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ZIC4Q8N9L1 334 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 PSMA8Q8TAA3 256 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 FBXO17Q96EF6 278 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 C3orf30Q96M34 536 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 OR7D2Q96RA2 312 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 SDF2Q99470 211 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 USB1Q9BQ65 265 aaKnown RBP8.39□□□□□ -1.07
MCF2L-223ENST00000473345 CCDC106Q9BWC9 280 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 SLC17A5Q9NRA2 495 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 CTPS2Q9NRF8 586 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ATP6V1HQ9UI12 483 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 KCNS2Q9ULS6 477 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 MOKQ9UQ07 419 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 DNAJC15Q9Y5T4 150 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 ATP23Q9Y6H3 246 aa8.39□□□□□ -1.07
MCF2L-223ENST00000473345 IGHV1-18A0A0C4DH31 117 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 CIB4A0PJX0 185 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ZC3H12DA2A288 527 aaKnown RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 SERINC4A6NH21 518 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 CCT8L1PA6NM43 557 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 GJE1A6NN92 205 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 GTPBP1O00178 669 aaKnown RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 SULT2B1O00204 365 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 KLF11O14901 512 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 SCAMP2O15127 329 aaKnown RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF264O43296 627 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 PLIN3O60664 434 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 LILRA1O75019 489 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 TGFAP01135 160 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 PGRP06401 933 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 CHRNGP07510 517 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 UROSP10746 265 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 UBL4AP11441 157 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 IMPDH2P12268 514 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 APEHP13798 732 aaKnown RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 KRT4P19013 534 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 PGM1P36871 562 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 CCT3P49368 545 aaKnown RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 GZMKP49863 264 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 SLC16A1P53985 500 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 H3F3AP84243 136 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 MERTKQ12866 999 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 TP53BP2Q13625 1128 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 PTGR1Q14914 329 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 MLC1Q15049 377 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 PDK3Q15120 406 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 TRIP10Q15642 601 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF141Q15928 474 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 MSMPQ1L6U9 139 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 FAM174BQ3ZCQ3 159 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 GALNTL6Q49A17 601 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 HIKESHIQ53FT3 197 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 SYT14P1Q58G82 188 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF544Q6NX49 715 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 C3orf33Q6P1S2 294 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 MTDHQ86UE4 582 aaKnown RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ADGRG3Q86Y34 549 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 UBE2J2Q8N2K1 259 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 TMCO5AQ8N6Q1 288 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 FAM71CQ8NEG0 241 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 SEMA6DQ8NFY4 1073 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 APH1AQ96BI3 265 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 CHMP6Q96FZ7 201 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 RADILQ96JH8 1075 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 GATA5Q9BWX5 397 aaPredicted RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ACTRT3Q9BYD9 372 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 LAT2Q9GZY6 243 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ADAM19Q9H013 955 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ACER3Q9NUN7 267 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 ASB6Q9NWX5 421 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 TAS2R16Q9NYV7 291 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 MGAT4BQ9UQ53 548 aa8.38□□□□□ -1.07
MCF2L-223ENST00000473345 NOSIPQ9Y314 301 aaKnown RBP8.38□□□□□ -1.07
MCF2L-223ENST00000473345 TMEM120BA0PK00 339 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 LYNX1G3V0Z9 82 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 AP3D1O14617 1153 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 KIAA0513O60268 411 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 EIF4E2O60573 245 aaKnown RBP8.37□□□□□ -1.07
MCF2L-223ENST00000473345 SHOX2O60902 331 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-223ENST00000473345 CYP7B1O75881 506 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 GSTA1P08263 222 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 UBTFL6P0CB48 400 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-223ENST00000473345 LYNX1P0DP58 116 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 ZNF23P17027 643 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 CCNA2P20248 432 aa8.37□□□□□ -1.07
MCF2L-223ENST00000473345 CALCRP30988 508 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms