RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	RPS4X	P62701	263 aa	Known RBP	7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	KCNJ10	P78508	379 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	TAB1	Q15750	504 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	STK11	Q15831	433 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	AP1AR	Q63HQ0	302 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	ATG16L1	Q676U5	607 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	NXN	Q6DKJ4	435 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	ABLIM2	Q6H8Q1	611 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	ZNF621	Q6ZSS3	439 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	TMPPE	Q6ZT21	453 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807		Q71RC1	249 aa	Predicted RBP	7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	SSX8	Q7RTT4	187 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	HMGN2P46	Q86SG4	172 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	CMIP	Q8IY22	773 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	GLB1L3	Q8NCI6	653 aa	Predicted RBP	7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	RAB3IL1	Q8TBN0	382 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	MGARP	Q8TDB4	240 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	FBXW5	Q969U6	566 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	TEX37	Q96LM6	180 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	ZNF300	Q96RE9	604 aa	Predicted RBP	7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	CTPS2	Q9NRF8	586 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	NKIRAS1	Q9NYS0	192 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	ING1	Q9UK53	422 aa	Predicted RBP	7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	HDGFL3	Q9Y3E1	203 aa		7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	ANK3	Q12955	4377 aa	Known RBP	7.91	□□□□□ -1.14
CHEK2-223	ENST00000472807	IGKV3D-15	A0A087WSY6	115 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	GOLGA8Q	A0A0J9YX86	632 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	GOLGA8O	A6NCC3	632 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	TRIM64	A6NGJ6	449 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	TRIM64B	A6NI03	449 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	AGAP5	A6NIR3	686 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	CLDN24	A6NM45	220 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807		C9JVG2	144 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	GOLGA8N	F8WBI6	632 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	RFXANK	O14593	260 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	SMAD7	O15105	426 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	DNPH1	O43598	174 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	BCAS1	O75363	584 aa	Predicted RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	SLC22A3	O75751	556 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	KRT75	O95678	551 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	IL6	P05231	212 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	CHRM4	P08173	479 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	NR2F1	P10589	423 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	KIT	P10721	976 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	GGT1	P19440	569 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	COX5A	P20674	150 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	IL12A	P29459	219 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	CDKN2C	P42773	168 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	IDH2	P48735	452 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	CLK1	P49759	484 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	POLR2H	P52434	150 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	ATP5J2	P56134	94 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	WDR4	P57081	412 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	CHRNE	Q04844	493 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	BSPH1	Q075Z2	132 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	PDK3	Q15120	406 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	PPA1	Q15181	289 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	SYPL1	Q16563	259 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	NCMAP	Q5T1S8	102 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	ADAM5	Q6NVV9	412 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	LRRC74B	Q6ZQY2	392 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	MTDH	Q86UE4	582 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	UBE2J2	Q8N2K1	259 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	ANKFN1	Q8N957	763 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	PIGX	Q8TBF5	258 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	PNPT1	Q8TCS8	783 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	WDR60	Q8WVS4	1066 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	IGFBPL1	Q8WX77	278 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	PMM1	Q92871	262 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	APH1A	Q96BI3	265 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	ZNF775	Q96BV0	537 aa	Predicted RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	DDIT4L	Q96D03	193 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	MUCL1	Q96DR8	90 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	INPP5K	Q9BT40	448 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	OR11A1	Q9GZK7	315 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	SLC38A1	Q9H2H9	487 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	WDR55	Q9H6Y2	383 aa	Predicted RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	ZNF701	Q9NV72	531 aa	Predicted RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	P2RX2	Q9UBL9	471 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	PRSS50	Q9UI38	385 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	LAMP3	Q9UQV4	416 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	NOSIP	Q9Y314	301 aa	Known RBP	7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	GPR45	Q9Y5Y3	372 aa		7.9	□□□□□ -1.14
CHEK2-223	ENST00000472807	SON	P18583	2426 aa	Known RBP	7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	TMED7-TICAM2	A0A0A6YYA0	188 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	PRAMEF27	A3QJZ7	478 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	CFAP73	A6NFT4	308 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	GPR171	O14626	319 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	EIF1B	O60739	113 aa	Known RBP	7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	ERLIN1	O75477	346 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	ANP32D	O95626	131 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	GSN	P06396	782 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	DBI	P07108	87 aa	Known RBP	7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	IL7R	P16871	459 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	CCNA2	P20248	432 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	IGHV1-2	P23083	117 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	SLC1A3	P43003	542 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	MAGEA8	P43361	318 aa		7.89	□□□□□ -1.15
CHEK2-223	ENST00000472807	MAP2K6	P52564	334 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms