RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 ATP10DQ9P241 1426 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 CLSPNQ9HAW4 1339 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 A0A087WZY1 265 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 GSAPA4D1B5 854 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 HCRTR1O43613 425 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 ICOSLGO75144 302 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 GIPP09681 153 aaPredicted RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 CALCBP10092 127 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 FGF9P31371 208 aaPredicted RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 CSNK1DP48730 415 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 SH3BGRP55822 239 aaPredicted RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 PAX5Q02548 391 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 MXD4Q14582 209 aaPredicted RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 PTGES3Q15185 160 aaKnown RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 KLF17Q5JT82 389 aaPredicted RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 ZFP2Q6ZN57 461 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 ACOT1Q86TX2 421 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 RALGPS2Q86X27 583 aaPredicted RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 GRAMD2AQ8IUY3 354 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 LRRC43Q8N309 656 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 ST8SIA1Q92185 356 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 C4orf36Q96KX1 117 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 C6orf203Q9P0P8 240 aaPredicted RBP4.04□□□□□ -1.76
SGCE-210ENST00000472326 ACTR3BQ9P1U1 418 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 MFHAS1Q9Y4C4 1052 aa4.04□□□□□ -1.76
SGCE-210ENST00000472326 IGKV1D-8A0A087WSZ0 117 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 A6NIZ1 184 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 KRTAP4-16G5E9R7 235 aaPredicted RBP4.03□□□□□ -1.76
SGCE-210ENST00000472326 OR1F1O43749 312 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 TM7SF2O76062 418 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 KIAA0754O94854 1291 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 PCCBP05166 539 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 RPS2P15880 293 aaKnown RBP4.03□□□□□ -1.76
SGCE-210ENST00000472326 POLR2EP19388 210 aaKnown RBP4.03□□□□□ -1.76
SGCE-210ENST00000472326 RAP1BP61224 184 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 PJVKQ0ZLH3 352 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 SCGB2A2Q13296 93 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 MADCAM1Q13477 382 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 NRF1Q16656 503 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 C1orf100Q5SVJ3 147 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 GPRC6AQ5T6X5 926 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 MFSD6LQ8IWD5 586 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 OR51G1Q8NGK1 321 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 NRIP2Q9BQI9 281 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 RWDD1Q9H446 243 aaPredicted RBP4.03□□□□□ -1.76
SGCE-210ENST00000472326 SIGLEC8Q9NYZ4 499 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 V9GY05 133 aa4.03□□□□□ -1.76
SGCE-210ENST00000472326 MYO15BQ96JP2 1530 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 NKX2-6A6NCS4 301 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 RS1O15537 224 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 ACADVLP49748 655 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 TAS2R19P59542 299 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 CCDC57Q2TAC2 916 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 TMEM41BQ5BJD5 291 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 CENPLQ8N0S6 344 aaPredicted RBP4.02□□□□□ -1.77
SGCE-210ENST00000472326 C6orf223Q8N319 242 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 ZNF540Q8NDQ6 660 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 OR51S1Q8NGJ8 323 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 FANK1Q8TC84 345 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 BRSK1Q8TDC3 778 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 SMYD3Q9H7B4 428 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 PHF11Q9UIL8 331 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 ERCC6L2Q5T890 1561 aa4.02□□□□□ -1.77
SGCE-210ENST00000472326 KIF21AQ7Z4S6 1674 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.01□□□□□ -1.77
SGCE-210ENST00000472326 A0A0G2JLM5 398 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 A0A1B0GUS0 222 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 ZSCAN12O43309 604 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 RIPK2O43353 540 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 UFL1O94874 794 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 AK1P00568 194 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 CHTF8P0CG12 524 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 ZNF44P15621 663 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 AP3M2P53677 418 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 ZNF763Q0D2J5 394 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 GGTA1PQ4G0N0 100 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 C6orf89Q6UWU4 347 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 COX15Q7KZN9 410 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 CCNL2Q96S94 520 aaPredicted RBP4.01□□□□□ -1.77
SGCE-210ENST00000472326 SLC35A5Q9BS91 424 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 SLC17A9Q9BYT1 436 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 DPH5Q9H2P9 285 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 AATFQ9NY61 560 aaKnown RBP eCLIP4.01□□□□□ -1.77
SGCE-210ENST00000472326 U3KQV3 271 aa4.01□□□□□ -1.77
SGCE-210ENST00000472326 ARAP1Q96P48 1450 aa4□□□□□ -1.77
SGCE-210ENST00000472326 E9PBE3 544 aa4□□□□□ -1.77
SGCE-210ENST00000472326 PES1O00541 588 aaKnown RBP4□□□□□ -1.77
SGCE-210ENST00000472326 ZNF324O75467 553 aaPredicted RBP4□□□□□ -1.77
SGCE-210ENST00000472326 TRIM16O95361 564 aa4□□□□□ -1.77
SGCE-210ENST00000472326 DIRAS3O95661 229 aa4□□□□□ -1.77
SGCE-210ENST00000472326 SLC25A27O95847 323 aa4□□□□□ -1.77
SGCE-210ENST00000472326 H2BFMP0C1H6 154 aa4□□□□□ -1.77
SGCE-210ENST00000472326 NT5EP21589 574 aa4□□□□□ -1.77
SGCE-210ENST00000472326 ANXA13P27216 316 aa4□□□□□ -1.77
SGCE-210ENST00000472326 DAP3P51398 398 aaKnown RBP4□□□□□ -1.77
SGCE-210ENST00000472326 HNRNPA3P51991 378 aaKnown RBP4□□□□□ -1.77
SGCE-210ENST00000472326 SUCLG1P53597 346 aaKnown RBP4□□□□□ -1.77
SGCE-210ENST00000472326 PFN3P60673 137 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms