RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 KDM4EB2RXH2 506 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 EBAG9O00559 213 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 GSC2O15499 205 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 ZNF208O43345 1280 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 CXCL13O43927 109 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 GLI4P10075 376 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 EIF1AXP47813 144 aaKnown RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 CLK1P49759 484 aaKnown RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 CARD18P57730 90 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 MS4A2Q01362 244 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 SRSF1Q07955 248 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 PMPCAQ10713 525 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 TRIM25Q14258 630 aaKnown RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 SGCBQ16585 318 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 IFI44LQ53G44 452 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 SYT14P1Q58G82 188 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 HBMQ6B0K9 141 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 SEM1Q6ZVN7 128 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 NCCRP1Q6ZVX7 275 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 OR10D3Q8NH80 312 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 PHF10Q8WUB8 498 aaKnown RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 DNAJA4Q8WW22 397 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 SLC38A4Q969I6 547 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 SLC47A1Q96FL8 570 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 HSH2DQ96JZ2 352 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 NSMCE2Q96MF7 247 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 CADM1Q9BY67 442 aaKnown RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 C12orf10Q9HB07 376 aa11.07□□□□□ -0.64
PRKCB-205ENST00000472066 PAQR5Q9NXK6 330 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 SAMD4AQ9UPU9 718 aaKnown RBP11.07□□□□□ -0.64
PRKCB-205ENST00000472066 A0A0B4J2E0 115 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 A0A1B0GX12 115 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 CPSF4LA6NMK7 179 aaKnown RBP11.06□□□□□ -0.64
PRKCB-205ENST00000472066 ACOT8O14734 319 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 PRKD3O94806 890 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 TFPIP10646 304 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 PNMTP11086 282 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 SLC7A1P30825 629 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 CDH12P55289 794 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 NUP107P57740 925 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 ALG10BQ5I7T1 473 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 MTFR2Q6P444 385 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 PLXDC2Q6UX71 529 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 DEF8Q6ZN54 512 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 TMPPEQ6ZT21 453 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 CCDC121Q6ZUS5 278 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 TSPYL5Q86VY4 417 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-205ENST00000472066 LSRQ86X29 649 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-205ENST00000472066 DHFR2Q86XF0 187 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 FAM86B1Q8N7N1 296 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 ADAMTS16Q8TE57 1224 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 GEMIN6Q8WXD5 167 aaKnown RBP11.06□□□□□ -0.64
PRKCB-205ENST00000472066 WNT2BQ93097 391 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 DDIT4LQ96D03 193 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 ASB9Q96DX5 294 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 CCDC120Q96HB5 630 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 PYURFQ96I23 114 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 ZNF845Q96IR2 970 aaPredicted RBP11.06□□□□□ -0.64
PRKCB-205ENST00000472066 ARL5BQ96KC2 179 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 OR5B2Q96R09 309 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 AMBRA1Q9C0C7 1298 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 OR11A1Q9GZK7 315 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 POLR2J2Q9GZM3 115 aaKnown RBP11.06□□□□□ -0.64
PRKCB-205ENST00000472066 POLR2J3Q9H1A7 115 aaKnown RBP11.06□□□□□ -0.64
PRKCB-205ENST00000472066 MUC13Q9H3R2 512 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 COQ10BQ9H8M1 238 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 SELENONQ9NZV5 590 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 CLCF1Q9UBD9 225 aa11.06□□□□□ -0.64
PRKCB-205ENST00000472066 UBR5O95071 2799 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 A0A087WUJ7 227 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 ZC3H12DA2A288 527 aaKnown RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 CLEC18AA5D8T8 446 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TRAPPC13A5PLN9 417 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 MBD3L4A6NDZ8 208 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 MBD3L3A6NE82 208 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 MBD3L5A6NJ08 208 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 SLC22A20A6NK97 555 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 ELOA3DA6NLF2 546 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 A8MVM7 634 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TOXO94900 526 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 AGFG2O95081 481 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 LYPD3O95274 346 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TGM6O95932 706 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 THY1P04216 161 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 IFNW1P05000 195 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 ATP6V1B2P21281 511 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TIMP3P35625 211 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 PER3P56645 1201 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 RAC3P60763 192 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 ADORA2A-AS1P86434 159 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TRAP1Q12931 704 aaKnown RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 MYBPHQ13203 477 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 PIN1Q13526 163 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 PON3Q15166 354 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 ELOA3BQ3SY89 546 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 SWT1Q5T5J6 900 aaKnown RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 RIPPLY2Q5TAB7 128 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 CLEC18BQ6UXF7 455 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms