RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 IFNGR1P15260 489 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 ATP5F1P24539 256 aaPredicted RBP16.5■□□□□ 0.23
SORT1-203ENST00000471996 MPGP29372 298 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 MAGEA8P43361 318 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 PRKAA2P54646 552 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 GNG11P61952 73 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 TSPO2Q5TGU0 170 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 SHQ1Q6PI26 577 aaKnown RBP16.5■□□□□ 0.23
SORT1-203ENST00000471996 VHLLQ6RSH7 139 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 TMEM234Q8WY98 164 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 L3HYPDHQ96EM0 354 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 BOD1Q96IK1 185 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 METTL2AQ96IZ6 378 aaKnown RBP16.5■□□□□ 0.23
SORT1-203ENST00000471996 SLC38A2Q96QD8 506 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 JMJD8Q96S16 334 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 ZNF747Q9BV97 191 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 RAB17Q9H0T7 212 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 MID1IP1Q9NPA3 183 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 RRAGDQ9NQL2 400 aaPredicted RBP16.5■□□□□ 0.23
SORT1-203ENST00000471996 SIRT3Q9NTG7 399 aaPredicted RBP16.5■□□□□ 0.23
SORT1-203ENST00000471996 PARPBPQ9NWS1 579 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 HIF1ANQ9NWT6 349 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 TRIM49D1C9J1S8 452 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 AKAP10O43572 662 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 SEC22BO75396 215 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 DDX5P17844 614 aaKnown RBP16.49■□□□□ 0.23
SORT1-203ENST00000471996 SLC1A3P43003 542 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 KHKP50053 298 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 SKP2Q13309 424 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 PDE7AQ13946 482 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 HIKESHIQ53FT3 197 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 SLC22A9Q8IVM8 553 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 ZCCHC24Q8N2G6 241 aaKnown RBP16.49■□□□□ 0.23
SORT1-203ENST00000471996 SVOPLQ8N434 492 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 UBASH3BQ8TF42 649 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 TMEM186Q96B77 213 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 PAFAH2Q99487 392 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 DOK1Q99704 481 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 FUT8Q9BYC5 575 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 GSTO2Q9H4Y5 243 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 OBP2BQ9NPH6 170 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 ACER3Q9NUN7 267 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 NINJ2Q9NZG7 142 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 USP22Q9UPT9 525 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 HDGFL3Q9Y3E1 203 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 GRIP1Q9Y3R0 1128 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 CCL27Q9Y4X3 112 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 PCDHGB1Q9Y5G3 927 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 SPIN1Q9Y657 262 aaPredicted RBP16.49■□□□□ 0.23
SORT1-203ENST00000471996 KCNE3Q9Y6H6 103 aa16.49■□□□□ 0.23
SORT1-203ENST00000471996 PRKDCP78527 4128 aaKnown RBP16.48■□□□□ 0.23
SORT1-203ENST00000471996 EFNA1P20827 205 aaPredicted RBP16.48■□□□□ 0.23
SORT1-203ENST00000471996 PDCD2Q16342 344 aaPredicted RBP16.48■□□□□ 0.23
SORT1-203ENST00000471996 SHISA2Q6UWI4 295 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 THSD4Q6ZMP0 1018 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 ADAMTS15Q8TE58 950 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 ARL5BQ96KC2 179 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 ACTRT3Q9BYD9 372 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 SLC9A8Q9Y2E8 581 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 FLVCR1Q9Y5Y0 555 aa16.48■□□□□ 0.23
SORT1-203ENST00000471996 hCG_2039718K7EN88 272 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 CYP7B1O75881 506 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 EPHA1P21709 976 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 APOBEC1P41238 236 aaKnown RBP16.47■□□□□ 0.23
SORT1-203ENST00000471996 H3F3AP84243 136 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 NAAAQ02083 359 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 C2orf54Q08AI8 447 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 PDZK1Q5T2W1 519 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 DNAJA3Q96EY1 480 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 CCT7Q99832 543 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 CCDC106Q9BWC9 280 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 CHRNA9Q9UGM1 479 aa16.47■□□□□ 0.23
SORT1-203ENST00000471996 LYNX1G3V0Z9 82 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 IGFBP1P08833 259 aaPredicted RBP16.46■□□□□ 0.23
SORT1-203ENST00000471996 LYNX1P0DP58 116 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 CDH2P19022 906 aaPredicted RBP16.46■□□□□ 0.23
SORT1-203ENST00000471996 PAX7P23759 505 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 PRPH2P23942 346 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 CLK1P49759 484 aaKnown RBP16.46■□□□□ 0.23
SORT1-203ENST00000471996 OR2B6P58173 313 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 ANKRD16Q6P6B7 361 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 NUP37Q8NFH4 326 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 OR4F15Q8NGB8 312 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 TSSK3Q96PN8 268 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 NMUR2Q9GZQ4 415 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 ZNF442Q9H7R0 627 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 CTPS2Q9NRF8 586 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 ZNF180Q9UJW8 692 aa16.46■□□□□ 0.23
SORT1-203ENST00000471996 FAF1Q9UNN5 650 aaPredicted RBP16.46■□□□□ 0.23
SORT1-203ENST00000471996 TMEM129A0AVI4 362 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 ANKRD28O15084 1053 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 URI1O94763 535 aaPredicted RBP16.45■□□□□ 0.22
SORT1-203ENST00000471996 MSMBP08118 114 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 KRT16P08779 473 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 SDC1P18827 310 aa16.45■□□□□ 0.22
SORT1-203ENST00000471996 FKBP2P26885 142 aaKnown RBP16.45■□□□□ 0.22
SORT1-203ENST00000471996 ADRM1Q16186 407 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms