RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZC3H12DA2A288 527 aaKnown RBP17.35■□□□□ 0.37
PSPC1-203ENST00000471658 KPNA4O00629 521 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-203ENST00000471658 PEPDP12955 493 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 ZNF23P17027 643 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 FPR1P21462 350 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 EGR4Q05215 589 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 LY6DQ14210 128 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 SWT1Q5T5J6 900 aaKnown RBP17.35■□□□□ 0.37
PSPC1-203ENST00000471658 PRICKLE2Q7Z3G6 844 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 GTPBP8Q8N3Z3 284 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-203ENST00000471658 Q8NA96 180 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 OR9Q2Q8NGE9 314 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 OR5K1Q8NHB7 308 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 PFN4Q8NHR9 129 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 TMEM239Q8WW34 195 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 MPP4Q96JB8 637 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 CIB1Q99828 191 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 SLC6A15Q9H2J7 730 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 ANKRD19PQ9H560 264 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 TMEM185BQ9H7F4 350 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 PDP1Q9P0J1 537 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-203ENST00000471658 TMCC3Q9ULS5 477 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 SLC6A5Q9Y345 797 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 MRPS18CQ9Y3D5 142 aaKnown RBP17.35■□□□□ 0.37
PSPC1-203ENST00000471658 ZNF337Q9Y3M9 751 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 ITPR1Q14643 2758 aa17.35■□□□□ 0.37
PSPC1-203ENST00000471658 FREM3P0C091 2139 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 BSNQ9UPA5 3926 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 SUSD5O60279 629 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 PNMTP11086 282 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 APOBEC1P41238 236 aaKnown RBP17.34■□□□□ 0.37
PSPC1-203ENST00000471658 EIF1P41567 113 aaKnown RBP17.34■□□□□ 0.37
PSPC1-203ENST00000471658 HTR3AP46098 478 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 SLC10A1Q14973 349 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 TRIP10Q15642 601 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 LRRC36Q1X8D7 754 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 MICAQ29983 383 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 C1QL3Q5VWW1 255 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 RPUSD3Q6P087 351 aaKnown RBP17.34■□□□□ 0.37
PSPC1-203ENST00000471658 SHQ1Q6PI26 577 aaKnown RBP17.34■□□□□ 0.37
PSPC1-203ENST00000471658 ZNF730Q6ZMV8 503 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 FAM109AQ8N4B1 249 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 OR4K5Q8NGD3 323 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 NRG4Q8WWG1 115 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 ACOT11Q8WXI4 607 aaPredicted RBP17.34■□□□□ 0.37
PSPC1-203ENST00000471658 PNPLA2Q96AD5 504 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 ZNF426Q9BUY5 554 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 OR11A1Q9GZK7 315 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 C12orf10Q9HB07 376 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 MEPEQ9NQ76 525 aaPredicted RBP17.34■□□□□ 0.37
PSPC1-203ENST00000471658 MED12Q93074 2177 aa17.34■□□□□ 0.37
PSPC1-203ENST00000471658 C7orf72A4D263 438 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 ACOT7O00154 380 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 CCNB2O95067 398 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 ZNF24P17028 368 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 SHC1P29353 583 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 GLYR1Q49A26 553 aaPredicted RBP17.33■□□□□ 0.37
PSPC1-203ENST00000471658 CMPK2Q5EBM0 449 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 TTC33Q6PID6 262 aaPredicted RBP17.33■□□□□ 0.37
PSPC1-203ENST00000471658 STK32CQ86UX6 486 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 NRMQ8IXM6 262 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 GIPC3Q8TF64 312 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 SLC25A18Q9H1K4 315 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 C20orf141Q9NUB4 165 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 STOML1Q9UBI4 398 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 CHRNA9Q9UGM1 479 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 PRDM4Q9UKN5 801 aa17.33■□□□□ 0.37
PSPC1-203ENST00000471658 G3V2T6 193 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 TFECO14948 347 aaPredicted RBP17.32■□□□□ 0.36
PSPC1-203ENST00000471658 PEX2P28328 305 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 ADH6P28332 368 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 STARP49675 285 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 OTUD3Q5T2D3 398 aaPredicted RBP17.32■□□□□ 0.36
PSPC1-203ENST00000471658 ZNF770Q6IQ21 691 aaPredicted RBP17.32■□□□□ 0.36
PSPC1-203ENST00000471658 MBOAT2Q6ZWT7 520 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 OR10G2Q8NGC3 310 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 SFXN2Q96NB2 322 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 GPA33Q99795 319 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 SLC29A1Q99808 456 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 PIGQQ9BRB3 760 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 ZDHHC11Q9H8X9 412 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 SMURF2Q9HAU4 748 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 USP24Q9UPU5 2620 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 LRRN3E7EW58 273 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 H3BML4 177 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 OR10H3O60404 316 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 GASTP01350 101 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 GFRA1P56159 465 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 ALDH6A1Q02252 535 aaKnown RBP17.32■□□□□ 0.36
PSPC1-203ENST00000471658 C19orf57Q0VDD7 668 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 TRILQ7L0X0 811 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 ZER1Q7Z7L7 766 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 ZDHHC13Q8IUH4 622 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 TEX19Q8NA77 164 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 SMPDL3BQ92485 455 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 KTI12Q96EK9 354 aaPredicted RBP17.32■□□□□ 0.36
PSPC1-203ENST00000471658 ARL5BQ96KC2 179 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 HS6ST2Q96MM7 605 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 COQ10BQ9H8M1 238 aa17.32■□□□□ 0.36
PSPC1-203ENST00000471658 QPCTLQ9NXS2 382 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms