RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 BHLHE40O14503 412 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 GNB5O14775 395 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 SURF4O15260 269 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 NUDT14O95848 222 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 HMGN1P05114 100 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 PIPP12273 146 aaPredicted RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 FUT1P19526 365 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 F8A1P23610 371 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ITPKBP27987 946 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 RBMS1P29558 406 aaKnown RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 POLR2HP52434 150 aaKnown RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 NUDT6P53370 316 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 RPS4XP62701 263 aaKnown RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 MVKQ03426 396 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 Q0VFX4 171 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 TOMM34Q15785 309 aaPredicted RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 SNAPC1Q16533 368 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 TMEM44Q2T9K0 475 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ZBED5Q49AG3 693 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 CLEC12AQ5QGZ9 265 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 FOXB2Q5VYV0 432 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 XAF1Q6GPH4 301 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ACSM5Q6NUN0 579 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 SLC30A6Q6NXT4 461 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 JMJD6Q6NYC1 403 aaPredicted RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 BORAQ6PGQ7 559 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 KCTD8Q6ZWB6 473 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 AHSA2Q719I0 299 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ASCL5Q7RTU5 278 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 SLC46A3Q7Z3Q1 461 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 OAFQ86UD1 273 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 RPS19BP1Q86WX3 136 aaKnown RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 CYP4Z2PQ8N1L4 340 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 GALNT15Q8N3T1 639 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 LNX2Q8N448 690 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 SVOPQ8N4V2 548 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 TCEANCQ8N8B7 351 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ZNF540Q8NDQ6 660 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 TMEM163Q8TC26 289 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 DUSP19Q8WTR2 217 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ASB15Q8WXK1 588 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ADAMTS14Q8WXS8 1223 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 SGCDQ92629 289 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 NKD1Q969G9 470 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 MYDGFQ969H8 173 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ZNF524Q96C55 264 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 SAMD8Q96LT4 415 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 FRMD6Q96NE9 622 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 IP6K3Q96PC2 410 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 IL4I1Q96RQ9 567 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 TUBA1CQ9BQE3 449 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 RHNO1Q9BSD3 238 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 COPS4Q9BT78 406 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 RBM38Q9H0Z9 239 aaKnown RBP8.54□□□□□ -1.04
VPS52-216ENST00000471309 UBQLN3Q9H347 655 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 MCCC2Q9HCC0 563 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 GALNT9Q9HCQ5 603 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 SH2D2AQ9NP31 389 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 PPP4R1LQ9P1A2 415 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ERVK-18Q9QC07 812 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 BAIAP2Q9UQB8 552 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ZNF337Q9Y3M9 751 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 TRAV27A0A087WT01 109 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 EFCAB10A6NFE3 127 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 KDM4EB2RXH2 506 aaPredicted RBP8.53□□□□□ -1.04
VPS52-216ENST00000471309 B4DXG7 233 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 TLX2O43763 284 aaPredicted RBP8.53□□□□□ -1.04
VPS52-216ENST00000471309 GMFGO60234 142 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 MAN1A2O60476 641 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 ENTPD6O75354 484 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 PTP4A3O75365 173 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 OR7A10O76100 309 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 NDUFB2O95178 105 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 PRKCAP17252 672 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 PCMT1P22061 227 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 CXCR1P25024 350 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 SLC6A6P31641 620 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 TTKP33981 857 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 CASP3P42574 277 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 SLC15A1P46059 708 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 NOVA1P51513 510 aaKnown RBP8.53□□□□□ -1.04
VPS52-216ENST00000471309 EGR4Q05215 589 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 ZNF91Q05481 1191 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 PIGFQ07326 219 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 FHL1Q13642 323 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 TBCEQ15813 527 aaPredicted RBP8.53□□□□□ -1.04
VPS52-216ENST00000471309 NEDD8Q15843 81 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 ZNF74Q16587 644 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 ANKDD1AQ495B1 522 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 SYT14P1Q58G82 188 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 BICRALQ6AI39 1079 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 C5orf46Q6UWT4 87 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 THSD4Q6ZMP0 1018 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 TMPRSS7Q7RTY8 843 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 GPR141Q7Z602 305 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 DTX1Q86Y01 620 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 GPALPP1Q8IXQ4 340 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 PAQR8Q8TEZ7 354 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms