RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 NCF1P14598 390 aaPredicted RBP3.29□□□□□ -1.88
SSB-209ENST00000470621 HTR1FP30939 366 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 FGF9P31371 208 aaPredicted RBP3.29□□□□□ -1.88
SSB-209ENST00000470621 RPS14P62263 151 aaKnown RBP3.29□□□□□ -1.88
SSB-209ENST00000470621 CNTN2Q02246 1040 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 ZNF763Q0D2J5 394 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 INAQ16352 499 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 USH1GQ495M9 461 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 TP53I3Q53FA7 332 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 ACOT1Q86TX2 421 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 ZNF429Q86V71 674 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 RALGPS2Q86X27 583 aaPredicted RBP3.29□□□□□ -1.88
SSB-209ENST00000470621 PNKDQ8N490 385 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 ATP6V0D2Q8N8Y2 350 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 RNF185Q96GF1 192 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 KCNA7Q96RP8 456 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 CCNL2Q96S94 520 aaPredicted RBP3.29□□□□□ -1.88
SSB-209ENST00000470621 RIT2Q99578 217 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 MAD1L1Q9Y6D9 718 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 PHF3Q92576 2039 aaKnown RBP3.29□□□□□ -1.88
SSB-209ENST00000470621 PLEKHH1Q9ULM0 1364 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 A0A1B0GUS0 222 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 RGSL1A5PLK6 1076 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 E7ESA3 106 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 SNAI2O43623 268 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 PCCAP05165 728 aaPredicted RBP3.28□□□□□ -1.88
SSB-209ENST00000470621 POLR2EP19388 210 aaKnown RBP3.28□□□□□ -1.88
SSB-209ENST00000470621 HTR2AP28223 471 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 CCR6P51684 374 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 AP3M2P53677 418 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 LINC00315P59091 139 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 SELENOTP62341 195 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 ARL6IP1Q15041 203 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 C1orf100Q5SVJ3 147 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 ZNF691Q5VV52 312 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 FAM71F2Q6NXP2 309 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 ZNF573Q86YE8 665 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 OR4D9Q8NGE8 314 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 RAET1EQ8TD07 263 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 TCTEX1D2Q8WW35 142 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 OR2M2Q96R28 347 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 ZNF670Q9BS34 389 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 SLC35A5Q9BS91 424 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 TMEM117Q9H0C3 514 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 COQ10BQ9H8M1 238 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 TAS2R3Q9NYW6 316 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 CHRNA9Q9UGM1 479 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 PRPF19Q9UMS4 504 aaKnown RBP3.28□□□□□ -1.88
SSB-209ENST00000470621 FRMPD3Q5JV73 1810 aa3.28□□□□□ -1.88
SSB-209ENST00000470621 CLSPNQ9HAW4 1339 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 A6NIZ1 184 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 MAGEB4O15481 346 aaPredicted RBP3.27□□□□□ -1.89
SSB-209ENST00000470621 RS1O15537 224 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 PAX7P23759 505 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 CA8P35219 290 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 PTGDSP41222 190 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 DAP3P51398 398 aaKnown RBP3.27□□□□□ -1.89
SSB-209ENST00000470621 RAP1BP61224 184 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 HTD2P86397 168 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 MADCAM1Q13477 382 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 PYHIN1Q6K0P9 492 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 KCNIP4Q6PIL6 250 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 MFSD6LQ8IWD5 586 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 MDS2Q8NDY4 140 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 STXBP6Q8NFX7 210 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 OR10A7Q8NGE5 316 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 BRSK1Q8TDC3 778 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 TMEM158Q8WZ71 300 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 ST8SIA1Q92185 356 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 SLC17A5Q9NRA2 495 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 AATFQ9NY61 560 aaKnown RBP eCLIP3.27□□□□□ -1.89
SSB-209ENST00000470621 C6orf203Q9P0P8 240 aaPredicted RBP3.27□□□□□ -1.89
SSB-209ENST00000470621 PHF11Q9UIL8 331 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 AURKCQ9UQB9 309 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 ASF1AQ9Y294 204 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 AK6Q9Y3D8 172 aaKnown RBP3.27□□□□□ -1.89
SSB-209ENST00000470621 V9GY05 133 aa3.27□□□□□ -1.89
SSB-209ENST00000470621 E9PBE3 544 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 PPIAL4DF5H284 164 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 P04436 131 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 ALOX5P09917 674 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 H2BFMP0C1H6 154 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 CHTF8P0CG12 524 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 CD86P42081 329 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 BPIFB3P59826 476 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 CSTF1Q05048 431 aaKnown RBP3.26□□□□□ -1.89
SSB-209ENST00000470621 NCR3LG1Q68D85 454 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 COX15Q7KZN9 410 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 PRSS41Q7RTY9 318 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 RDH10Q8IZV5 341 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 DHRSXQ8N5I4 330 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 CLDN19Q8N6F1 224 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 OR51S1Q8NGJ8 323 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 CCDC110Q8TBZ0 833 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 SPRYD4Q8WW59 207 aaPredicted RBP3.26□□□□□ -1.89
SSB-209ENST00000470621 PIGCQ92535 297 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 ARPC1AQ92747 370 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 STARD4Q96DR4 205 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 GPA33Q99795 319 aa3.26□□□□□ -1.89
SSB-209ENST00000470621 SMYD3Q9H7B4 428 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms