RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 LYVE1Q9Y5Y7 322 aa6.06□□□□□ -1.44
VAMP3-202ENST00000470357 CENPEQ02224 2701 aa6.06□□□□□ -1.44
VAMP3-202ENST00000470357 EML6Q6ZMW3 1958 aa6.06□□□□□ -1.44
VAMP3-202ENST00000470357 MPDZO75970 2070 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 NPIPA5A0A0B4J1W7 369 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 PRAMEF25A6NGN4 478 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 TMEM200CA6NKL6 621 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ZNF891A8MT65 544 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 NPIPA7E9PJI5 369 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 PRKNO60260 465 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 FADS1O60427 444 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 UGT2B11O75310 529 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 CYP7B1O75881 506 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 EPPINO95925 133 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ADAP00813 363 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 TP53P04637 393 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 LINGO3P0C6S8 592 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 UBTFL6P0CB48 400 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 NPIPA8P0DM63 369 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 PNMTP11086 282 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 LIFP15018 202 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ACADSP16219 412 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ZNF26P17031 533 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 PGCP20142 388 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 F8A1P23610 371 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 RBM34P42696 430 aaKnown RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 GIPRP48546 466 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 RPS6KA3P51812 740 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 CDH12P55289 794 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 SOX8P57073 446 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 TEKQ02763 1124 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 SRSF6Q13247 344 aaKnown RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 IL10RAQ13651 578 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ATP1A4Q13733 1029 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 CBFBQ13951 182 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 KCNMB1Q16558 191 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 MICAQ29983 383 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ZNF791Q3KP31 576 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 FGD3Q5JSP0 725 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ENTPD8Q5MY95 495 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 OTUD3Q5T2D3 398 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 WLSQ5T9L3 541 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ABHD17BQ5VST6 288 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 FNDC7Q5VTL7 733 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 FAM69BQ5VUD6 431 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 WBP2NLQ6ICG8 309 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 SLC30A6Q6NXT4 461 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ULK3Q6PHR2 472 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 OLIG3Q7RTU3 272 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 EPHX4Q8IUS5 362 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 PRR22Q8IZ63 422 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 CDK20Q8IZL9 346 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 RNF113BQ8IZP6 322 aaKnown RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 TMCO5AQ8N6Q1 288 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ATG16L2Q8NAA4 619 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 POGLUT1Q8NBL1 392 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ADAMTS16Q8TE57 1224 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 THAP3Q8WTV1 239 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 NRG4Q8WWG1 115 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 TMEM234Q8WY98 164 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 CNOT9Q92600 299 aaKnown RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 KIRREL1Q96J84 757 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ZNF597Q96LX8 424 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 TACO1Q9BSH4 297 aaKnown RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 OSBPL11Q9BXB4 747 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 LHPPQ9H008 270 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 METTL7AQ9H8H3 244 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 COQ10BQ9H8M1 238 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 C12orf10Q9HB07 376 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 ACER3Q9NUN7 267 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 RLIMQ9NVW2 624 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 HPF1Q9NWY4 346 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 SMPD3Q9NY59 655 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 KLRF1Q9NZS2 232 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 CNIH4Q9P003 139 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 PDP1Q9P0J1 537 aaPredicted RBP6.05□□□□□ -1.44
VAMP3-202ENST00000470357 RAB26Q9ULW5 256 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 A4GNTQ9UNA3 340 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 MGAT4BQ9UQ53 548 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 POLHQ9Y253 713 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 U3KQV3 271 aa6.05□□□□□ -1.44
VAMP3-202ENST00000470357 SPTBN1Q01082 2364 aaKnown RBP6.04□□□□□ -1.44
VAMP3-202ENST00000470357 CNTRLQ7Z7A1 2325 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 LRBAP50851 2863 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 IGLV3-32A0A0A0MS00 114 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 CENPVL1A0A0U1RR11 272 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 SH3PXD2BA1X283 911 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 CPSF4LA6NMK7 179 aaKnown RBP6.04□□□□□ -1.44
VAMP3-202ENST00000470357 FAM47E-STBD1D6RA91 191 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 SOCS2O14508 198 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 EI24O14681 340 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 HCRTR2O43614 444 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 CHP2O43745 196 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 DIRAS1O95057 198 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 SNX4O95219 450 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 ANGPTL1O95841 491 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 ALPLP05186 524 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 ITGAMP11215 1152 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 GSTM3P21266 225 aa6.04□□□□□ -1.44
VAMP3-202ENST00000470357 IGFBP5P24593 272 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms