RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 H0Y3Z8 333 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 ZNF208O43345 1280 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 EFNA2O43921 213 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 TPST2O60704 377 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 TACR3P29371 465 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 CLK1P49759 484 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 CLDN15P56746 228 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 CLDN20P56880 219 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 C1orf185Q5T7R7 199 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 C1QL3Q5VWW1 255 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 ZNF613Q6PF04 617 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 ATG4DQ86TL0 474 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 CARM1Q86X55 608 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 LACC1Q8IV20 430 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR4D11Q8NGI4 311 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 PHF10Q8WUB8 498 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 DNAJA4Q8WW22 397 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 GEMIN6Q8WXD5 167 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 ASB9Q96DX5 294 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 KLHL15Q96M94 604 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 POLR2J2Q9GZM3 115 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 POLR2J3Q9H1A7 115 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 CTPS2Q9NRF8 586 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 SERINC1Q9NRX5 453 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 PAQR5Q9NXK6 330 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 CAMK2AQ9UQM7 478 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 SH3GLB1Q9Y371 365 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 FAM215AQ9Y5M1 114 aa13.44□□□□□ -0.26
CDC42SE1-203ENST00000470278 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 A0A0B4J2E0 115 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 A0A1B0GWA3 101 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 A0A1B0GX12 115 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 CD8B2A6NJW9 211 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 EBAG9O00559 213 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 DNAJC8O75937 253 aaPredicted RBP13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 RPS3AP61247 264 aaKnown RBP13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 HOXC5Q00444 222 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 TRIM25Q14258 630 aaKnown RBP13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 SYT14P1Q58G82 188 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 MTX3Q5HYI7 312 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 LCN8Q6JVE9 175 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 ZNF585AQ6P3V2 769 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 MTFR2Q6P444 385 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 PGM2L1Q6PCE3 622 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 ULK3Q6PHR2 472 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 B3GNT6Q6ZMB0 384 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 ADGRG3Q86Y34 549 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 UBQLNLQ8IYU4 475 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 CADM2Q8N3J6 435 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 PHF3Q92576 2039 aaKnown RBP13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 TPD52L3Q96J77 140 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 HSH2DQ96JZ2 352 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 DMRTA2Q96SC8 542 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 THTPAQ9BU02 230 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 LRMDAQ9H2I8 198 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 TMEM185BQ9H7F4 350 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 MEMO1Q9Y316 297 aa13.43□□□□□ -0.26
CDC42SE1-203ENST00000470278 CCDC168Q8NDH2 2452 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 ARHGAP21Q5T5U3 1957 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 TMED7-TICAM2A0A0A6YYA0 188 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 SEC14L5O43304 696 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 PDE5AO76074 875 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 ZNF682O95780 498 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 PNMTP11086 282 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 SHC1P29353 583 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 MSX2P35548 267 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 SUCLG1P53597 346 aaKnown RBP13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 SRYQ05066 204 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR1Q1Q15612 314 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 IFI44LQ53G44 452 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 NSUN5P2Q63ZY6 315 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 RTL6Q6ICC9 239 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 VTCN1Q7Z7D3 282 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 RBM45Q8IUH3 476 aaKnown RBP13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 OR2V1Q8NHB1 315 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 VANGL1Q8TAA9 524 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 POP5Q969H6 163 aaKnown RBP13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 MCHR1Q99705 422 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 TUBA1CQ9BQE3 449 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 MMADHCQ9H3L0 296 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 COQ10BQ9H8M1 238 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 CALHM2Q9HA72 323 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 TMEM27Q9HBJ8 222 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 RPS6KB2Q9UBS0 482 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 SLC5A6Q9Y289 635 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 TMED7Q9Y3B3 224 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 HDGFL3Q9Y3E1 203 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 ZNF175Q9Y473 711 aa13.42□□□□□ -0.26
CDC42SE1-203ENST00000470278 CACNA1CQ13936 2221 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 A0A0J9YW62 118 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 MBD3L4A6NDZ8 208 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 MBD3L3A6NE82 208 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 MBD3L5A6NJ08 208 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CLCA1A8K7I4 914 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 H0YC42 278 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 CCL21O00585 134 aa13.41□□□□□ -0.26
CDC42SE1-203ENST00000470278 EIF1AYO14602 144 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms