RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 TMEM71Q6P5X7 295 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 C5orf46Q6UWT4 87 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 ASPGQ86U10 573 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 TMEM151BQ8IW70 566 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 OTUB2Q96DC9 234 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 PTPN18Q99952 460 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 ZNF251Q9BRH9 671 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 TRMT61BQ9BVS5 477 aaKnown RBP8.83□□□□□ -1
NHLRC3-203ENST00000470258 GPR62Q9BZJ7 368 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 FKRPQ9H9S5 495 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 CACYBPQ9HB71 228 aaKnown RBP8.83□□□□□ -1
NHLRC3-203ENST00000470258 POT1Q9NUX5 634 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 MYADML2A6NDP7 307 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 ANKRD61A6NGH8 418 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 SNRPGP15A8MWD9 76 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 PSMD9O00233 223 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 PLPP1O14494 284 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 NDUFB6O95139 128 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 FGBP02675 491 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 GP1BAP07359 652 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 BMP7P18075 431 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 NAA10P41227 235 aaPredicted RBP8.83□□□□□ -1
NHLRC3-203ENST00000470258 SPINT3P49223 89 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 P2RX1P51575 399 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 TAF13Q15543 124 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 DEFB115Q30KQ5 88 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 SSX6Q7RTT6 188 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 MRGPREQ86SM8 312 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 BEST3Q8N1M1 668 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 ARL14Q8N4G2 192 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 CAMKVQ8NCB2 501 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 CHST14Q8NCH0 376 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 PAQR8Q8TEZ7 354 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 S100A16Q96FQ6 103 aaKnown RBP8.83□□□□□ -1
NHLRC3-203ENST00000470258 C16orf58Q96GQ5 468 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 BBS4Q96RK4 519 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 PTDSS2Q9BVG9 487 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 WDR13Q9H1Z4 485 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 OR52D1Q9H346 318 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 GPN3Q9UHW5 284 aaPredicted RBP8.83□□□□□ -1
NHLRC3-203ENST00000470258 PCOLCE2Q9UKZ9 415 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 SLC22A7Q9Y694 548 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 KCNE3Q9Y6H6 103 aa8.83□□□□□ -1
NHLRC3-203ENST00000470258 FADS1O60427 444 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 RNGTTO60942 597 aaKnown RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 ITGA10O75578 1167 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 C8orf89P0DMQ9 161 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ANXA11P50995 505 aaKnown RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 NCBP2P52298 156 aaKnown RBP eCLIP8.82□□□□□ -1
NHLRC3-203ENST00000470258 RPS15P62841 145 aaKnown RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 RBM39Q14498 530 aaKnown RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 COL19A1Q14993 1142 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 TRAM1Q15629 374 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ELFN2Q5R3F8 820 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 YOD1Q5VVQ6 348 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 PRSS55Q6UWB4 352 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 UNQ6126/PRO20091Q6UXV3 157 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 LILRB2Q8N423 598 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 PHOSPHO1Q8TCT1 267 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 PGLYRP3Q96LB9 341 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 MCHR1Q99705 422 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 PIGMQ9H3S5 423 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 EXO5Q9H790 373 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ACSS1Q9NUB1 689 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 ENTPD4Q9Y227 616 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 LAMA3Q16787 3333 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 TRBV2A0A0J9YWF9 115 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 F5H0A9 414 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 FOXE1O00358 373 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 SCAMP1O15126 338 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ADAM12O43184 909 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 PRICKLE3O43900 615 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 EIF1BO60739 113 aaKnown RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 SLCO2B1O94956 709 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ZDHHC11BP0C7U3 371 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 MGMTP16455 207 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ADCYAP1P18509 176 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 CDK2P24941 298 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 EDNRAP25101 427 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 PTAFRP25105 342 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 EIF1P41567 113 aaKnown RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 CENPAP49450 140 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 NRG3P56975 720 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 CLDN2P57739 230 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 RAB5BP61020 215 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 HTRA3P83110 453 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 TSC22D1Q15714 1073 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 CCL14Q16627 93 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ZNF750Q32MQ0 723 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 HTR3DQ70Z44 454 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 PXKQ7Z7A4 578 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 DCAF4L2Q8NA75 395 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 TMIEQ8NEW7 156 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 ACOT11Q8WXI4 607 aaPredicted RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 MRPL48Q96GC5 212 aaKnown RBP8.82□□□□□ -1
NHLRC3-203ENST00000470258 SEC22AQ96IW7 307 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 CAMK1GQ96NX5 476 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 NRTNQ99748 197 aa8.82□□□□□ -1
NHLRC3-203ENST00000470258 RIOK2Q9BVS4 552 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms