RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MVDP53602 400 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 MAPK11Q15759 364 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 PDCD4Q53EL6 469 aaKnown RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 COX20Q5RI15 118 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 BHLHA15Q7RTS1 189 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 MAVSQ7Z434 540 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 ATG4DQ86TL0 474 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 MTDHQ86UE4 582 aaKnown RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 ADGRG3Q86Y34 549 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 CIARTQ8N365 385 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 ARFGAP2Q8N6H7 521 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 LILRB1Q8NHL6 650 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 ZNF563Q8TA94 476 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 AKAP1Q92667 903 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 PMM1Q92871 262 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 ARL5BQ96KC2 179 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 SLC6A13Q9NSD5 602 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 HDGFL3Q9Y3E1 203 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 RNF115Q9Y4L5 304 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 PLCE1Q9P212 2302 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 DSPPQ9NZW4 1301 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 SLCO1B7G3V0H7 640 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 AP3D1O14617 1153 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 HEXAP06865 529 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 IGHV1-2P23083 117 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 FKBP2P26885 142 aaKnown RBP14.42□□□□□ -0.1
COL9A3-208ENST00000469802 MAGEA8P43361 318 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 SLC16A1P53985 500 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 LTBQ06643 244 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 ATG16L1Q676U5 607 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 GALNT5Q7Z7M9 940 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 PIWIL2Q8TC59 973 aaKnown RBP14.42□□□□□ -0.1
COL9A3-208ENST00000469802 MGARPQ8TDB4 240 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 TMEM171Q8WVE6 324 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 WDR60Q8WVS4 1066 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 ZBTB18Q99592 522 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 OR11A1Q9GZK7 315 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 ESRP2Q9H6T0 727 aaKnown RBP14.42□□□□□ -0.1
COL9A3-208ENST00000469802 SDR39U1Q9NRG7 319 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-208ENST00000469802 EMC3Q9P0I2 261 aa14.42□□□□□ -0.1
COL9A3-208ENST00000469802 H7C1Q1 480 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 LYZL6O75951 148 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 PGM3O95394 542 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 IL6P05231 212 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 GSNP06396 782 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 TFPIP10646 304 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 KITP10721 976 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 HTR3AP46098 478 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 MAGOHP61326 146 aaKnown RBP14.41□□□□□ -0.1
COL9A3-208ENST00000469802 H3F3AP84243 136 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 SLC9B1Q4ZJI4 515 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 MRPL2Q5T653 305 aaKnown RBP14.41□□□□□ -0.1
COL9A3-208ENST00000469802 CLEC9AQ6UXN8 241 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 DNAJC14Q6Y2X3 702 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-208ENST00000469802 ZNF621Q6ZSS3 439 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 MSANTD1Q6ZTZ1 278 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.41□□□□□ -0.1
COL9A3-208ENST00000469802 PIGXQ8TBF5 258 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 PNPT1Q8TCS8 783 aaKnown RBP14.41□□□□□ -0.1
COL9A3-208ENST00000469802 ZNF775Q96BV0 537 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-208ENST00000469802 CXorf56Q9H5V9 222 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 MANSC1Q9H8J5 431 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 TMBIM4Q9HC24 238 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 NGBQ9NPG2 151 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 ZIM2Q9NZV7 527 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 CR1P17927 2039 aa14.41□□□□□ -0.1
COL9A3-208ENST00000469802 TRIM64A6NGJ6 449 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 TRIM64BA6NI03 449 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 FAM171A2A8MVW0 826 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 OVOL3O00110 214 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 RFXANKO14593 260 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 KLF11O14901 512 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 ZNF208O43345 1280 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 RAMP1O60894 148 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 SLC22A3O75751 556 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 KRT75O95678 551 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 DBIP07108 87 aaKnown RBP14.4□□□□□ -0.1
COL9A3-208ENST00000469802 CD3EP07766 207 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 DANCRP0C864 163 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 ZCCHC18P0CG32 403 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 NTF4P34130 210 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 IDH2P48735 452 aaKnown RBP14.4□□□□□ -0.1
COL9A3-208ENST00000469802 POLR2HP52434 150 aaKnown RBP14.4□□□□□ -0.1
COL9A3-208ENST00000469802 BSPH1Q075Z2 132 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 EPS8Q12929 822 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 GSTA3Q16772 222 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 BEND6Q5SZJ8 279 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-208ENST00000469802 Q71RC1 249 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-208ENST00000469802 SSX8Q7RTT4 187 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 LSRQ86X29 649 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-208ENST00000469802 FBXW5Q969U6 566 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 ZHX1-C8orf76Q96EF9 292 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 OR52B2Q96RD2 323 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 BDH2Q9BUT1 245 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 MTHFD2LQ9H903 347 aaPredicted RBP14.4□□□□□ -0.1
COL9A3-208ENST00000469802 NKIRAS1Q9NYS0 192 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 MALT1Q9UDY8 824 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 OSGIN1Q9UJX0 560 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 TRAPPC4Q9Y296 219 aa14.4□□□□□ -0.1
COL9A3-208ENST00000469802 TMED7-TICAM2A0A0A6YYA0 188 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms