RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 FAM214BQ7L5A3 538 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 FAM222BQ8WU58 562 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 TMEM234Q8WY98 164 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 CNOT9Q92600 299 aaKnown RBP9.97□□□□□ -0.81
COL4A6-205ENST00000468338 GMPPAQ96IJ6 420 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-205ENST00000468338 ZNF559Q9BR84 538 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 RBM24Q9BX46 236 aaKnown RBP9.97□□□□□ -0.81
COL4A6-205ENST00000468338 RABEP2Q9H5N1 569 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 TMEM185BQ9H7F4 350 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 BCL2L10Q9HD36 194 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 PLSCR4Q9NRQ2 329 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 GLRX2Q9NS18 164 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 GALNT8Q9NY28 637 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 CALML5Q9NZT1 146 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 CRIM1Q9NZV1 1036 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 SLAMF8Q9P0V8 285 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 P2RX2Q9UBL9 471 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 PRDM4Q9UKN5 801 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 PRR14LQ5THK1 2151 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 CSMD2Q7Z408 3487 aa9.97□□□□□ -0.81
COL4A6-205ENST00000468338 A0A1W2PP18 115 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 GJE1A6NN92 205 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 SS18L1O75177 396 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-205ENST00000468338 CTAG2O75638 210 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 DBIP07108 87 aaKnown RBP9.96□□□□□ -0.82
COL4A6-205ENST00000468338 VSIG8P0DPA2 414 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 NR2F1P10589 423 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 SFTPDP35247 375 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 CRATP43155 626 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 CARD18P57730 90 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 RAC3P60763 192 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 SNTB1Q13884 538 aaKnown RBP9.96□□□□□ -0.82
COL4A6-205ENST00000468338 ZNF239Q16600 458 aaKnown RBP9.96□□□□□ -0.82
COL4A6-205ENST00000468338 TMEM176BQ3YBM2 270 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-205ENST00000468338 AGKQ53H12 422 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 PRAMEF8Q5VWM4 474 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 PRAMEF7Q5VXH5 474 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 DLEU7Q6UYE1 221 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 PLEKHM3Q6ZWE6 761 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 TMCO5AQ8N6Q1 288 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 RFWD2Q8NHY2 731 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 RNF128Q8TEB7 428 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 TSPEARQ8WU66 669 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 CPNE4Q96A23 557 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-205ENST00000468338 CCDC106Q9BWC9 280 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 SRXN1Q9BYN0 137 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 RAD21L1Q9H4I0 556 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 CCDC134Q9H6E4 229 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 GP6Q9HCN6 339 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 VAPAQ9P0L0 249 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 MCTS1Q9ULC4 181 aaKnown RBP9.96□□□□□ -0.82
COL4A6-205ENST00000468338 CHST2Q9Y4C5 530 aa9.96□□□□□ -0.82
COL4A6-205ENST00000468338 TACC2O95359 2948 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 CDHR4A6H8M9 788 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 TUBAL3A6NHL2 446 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 NR5A2O00482 541 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 CYP7B1O75881 506 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 GPX2P18283 190 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 APOBEC1P41238 236 aaKnown RBP9.95□□□□□ -0.82
COL4A6-205ENST00000468338 CCR4P51679 360 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 CRISP3P54108 245 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 MYBPHQ13203 477 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 MRPL2Q5T653 305 aaKnown RBP9.95□□□□□ -0.82
COL4A6-205ENST00000468338 RNF220Q5VTB9 566 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 C3orf33Q6P1S2 294 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 GRINAQ7Z429 371 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 HMGN2P46Q86SG4 172 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 LUZP2Q86TE4 346 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 ADGRG3Q86Y34 549 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 PEX5LQ8IYB4 626 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 ZZZ3Q8IYH5 903 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 C10orf111Q8N326 155 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 DPP10Q8N608 796 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 ARFGAP2Q8N6H7 521 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 CNEP1R1Q8N9A8 125 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 OR6K3Q8NGY3 331 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 SLC25A43Q8WUT9 341 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-205ENST00000468338 WDR60Q8WVS4 1066 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 THOC1Q96FV9 657 aaKnown RBP9.95□□□□□ -0.82
COL4A6-205ENST00000468338 TMEM19Q96HH6 336 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 DACH2Q96NX9 599 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 RSPO3Q9BXY4 272 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-205ENST00000468338 A4GALTQ9NPC4 353 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 TIGARQ9NQ88 270 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 ELOVL5Q9NYP7 299 aa9.95□□□□□ -0.82
COL4A6-205ENST00000468338 ING1Q9UK53 422 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-205ENST00000468338 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
COL4A6-205ENST00000468338 A0A0G2JPF8 293 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 HNRNPCL2B2RXH8 293 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 HNRNPCL3B7ZW38 293 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 ATP8B1O43520 1251 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 HNRNPCL1O60812 293 aaKnown RBP9.94□□□□□ -0.82
COL4A6-205ENST00000468338 GOSR1O95249 250 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 SYNGR4O95473 234 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 BCHEP06276 602 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 PABPC4LP0CB38 370 aaKnown RBP9.94□□□□□ -0.82
COL4A6-205ENST00000468338 HNRNPCL4P0DMR1 293 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 IL7RP16871 459 aa9.94□□□□□ -0.82
COL4A6-205ENST00000468338 PPIBP23284 216 aaKnown RBP9.94□□□□□ -0.82
COL4A6-205ENST00000468338 FKBP2P26885 142 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms