RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
PRPF38B-204ENST00000467302 MRPS17Q9Y2R5 130 aaKnown RBP13.59□□□□□ -0.23
PRPF38B-204ENST00000467302 ENTPD2Q9Y5L3 495 aa13.59□□□□□ -0.23
PRPF38B-204ENST00000467302 NPFFR2Q9Y5X5 522 aa13.59□□□□□ -0.23
PRPF38B-204ENST00000467302 SCN3AQ9NY46 2000 aa13.59□□□□□ -0.23
PRPF38B-204ENST00000467302 URADA6NGE7 173 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 C2orf74A8MZ97 194 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 J3QLW9 94 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 PEX12O00623 359 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 CTSVO60911 334 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 RFPL3O75679 317 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 CLUP10909 449 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 ZNF19P17023 458 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 BLKP51451 505 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 NRG3P56975 720 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 PLAURQ03405 335 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 ACSM3Q53FZ2 586 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 RPTNQ6XPR3 784 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 KRT74Q7RTS7 529 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 FAM109AQ8N4B1 249 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 SLC2A12Q8TD20 617 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 YIPF5Q969M3 257 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 SERINC2Q96SA4 455 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 MEPEQ9NQ76 525 aaPredicted RBP13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 TMEM74BQ9NUR3 256 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 DAPP1Q9UN19 280 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 NUBP2Q9Y5Y2 271 aa13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 ARHGEF17Q96PE2 2063 aaPredicted RBP13.58□□□□□ -0.24
PRPF38B-204ENST00000467302 IGHV1OR15-9A0A0B4J2B8 117 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 P2RX6O15547 441 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 TCRBP04435 133 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 CELA2BP08218 269 aaPredicted RBP13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 STOMP27105 288 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ACVR1BP36896 505 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 CAPZA2P47755 286 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ARPC4P59998 168 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SUZ12Q15022 739 aaKnown RBP13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 AMZ1Q400G9 498 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 DEFB134Q4QY38 66 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ZBTB37Q5TC79 503 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 BMP8AQ7Z5Y6 402 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 PARGQ86W56 976 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 LRRC17Q8N6Y2 441 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 CAMKVQ8NCB2 501 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 OR5J2Q8NH18 312 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SLC37A2Q8TED4 501 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SMAP2Q8WU79 429 aaPredicted RBP13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 RLN3Q8WXF3 142 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SMPDL3BQ92485 455 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 GHSRQ92847 366 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 KLHDC7BQ96G42 594 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 MED30Q96HR3 178 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 DPAGT1Q9H3H5 408 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ZCCHC4Q9H5U6 513 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 DIABLOQ9NR28 239 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 HRASLS2Q9NWW9 162 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ST6GALNAC2Q9UJ37 374 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 FBXL4Q9UKA2 621 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 PILRAQ9UKJ1 303 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SLC22A7Q9Y694 548 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 TRAV6A0A075B6T7 132 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 TRAV27A0A087WT01 109 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 TRAV1-2A0A0B4J238 106 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 RIIAD1A6NNX1 92 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 RAB3BP20337 219 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 MMP15P51511 669 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SLC16A1P53985 500 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 C1orf61Q13536 156 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 CRMP1Q14194 572 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 CEP78Q5JTW2 689 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 CD276Q5ZPR3 534 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 FCRLBQ6BAA4 426 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 FAAH2Q6GMR7 532 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 LYPD4Q6UWN0 246 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SSX6Q7RTT6 188 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 SFTPA2Q8IWL1 248 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 CDK20Q8IZL9 346 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 MS4A15Q8N5U1 240 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ZNF655Q8N720 491 aaPredicted RBP13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 PHF21AQ96BD5 680 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 PEX11GQ96HA9 241 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ORAI3Q9BRQ5 295 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 RANBP3Q9H6Z4 567 aaPredicted RBP13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ADAP2Q9NPF8 381 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 B3GNT2Q9NY97 397 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 ING4Q9UNL4 249 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 MED31Q9Y3C7 131 aa13.57□□□□□ -0.24
PRPF38B-204ENST00000467302 A0A087WV62 115 aa13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 NPIPA5A0A0B4J1W7 369 aa13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 NPIPA7E9PJI5 369 aa13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 NOS1APO75052 506 aaPredicted RBP13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 UBL3O95164 117 aa13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 NPIPA8P0DM63 369 aa13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 SAGP10523 405 aaPredicted RBP13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 PYCR1P32322 319 aa13.56□□□□□ -0.24
PRPF38B-204ENST00000467302 MAP3K8P41279 467 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms