RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ZCCHC3Q9NUD5 404 aaKnown RBP2.45□□□□□ -2.02
XRN1-206ENST00000467077 LSM7Q9UK45 103 aaKnown RBP2.45□□□□□ -2.02
XRN1-206ENST00000467077 NUMA1Q14980 2115 aa2.45□□□□□ -2.02
XRN1-206ENST00000467077 APC2O95996 2303 aa2.45□□□□□ -2.02
XRN1-206ENST00000467077 COL6A6A6NMZ7 2263 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 FBN2P35556 2912 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ZSCAN5CA6NGD5 496 aaPredicted RBP2.44□□□□□ -2.02
XRN1-206ENST00000467077 PP2D1A8MPX8 630 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ZNF487B1APH4 448 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 H0YCG3 227 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 SLC28A1O00337 649 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 CLDN5O00501 218 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 SDC3O75056 442 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 BAG2O95816 211 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 IGLV3-19P01714 112 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 CISD3P0C7P0 127 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 UGT1A6P19224 532 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 GPX3P22352 226 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 GLRA1P23415 457 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ACP1P24666 158 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ALDH3B1P43353 468 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 CBX3Q13185 183 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 MEF2DQ14814 521 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 HEPACAMQ14CZ8 416 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 IGFBP7Q16270 282 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 C17orf58Q2M2W7 97 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 WSCD2Q2TBF2 565 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 LINC00303Q3SY05 128 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 B3GLCTQ6Y288 498 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ZNF600Q6ZNG1 722 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 WDR49Q8IV35 697 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 PEX5LQ8IYB4 626 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 LRRC52Q8N7C0 313 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 OR2T3Q8NH03 318 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 OR4L1Q8NH43 312 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 OR4A16Q8NH70 328 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 NTNG2Q96CW9 530 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 PCED1BQ96HM7 432 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 PPP1R16AQ96I34 528 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 CCNL2Q96S94 520 aaPredicted RBP2.44□□□□□ -2.02
XRN1-206ENST00000467077 KCNK16Q96T55 309 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ATP6V0BQ99437 205 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 PLIN2Q99541 437 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 PKMYT1Q99640 499 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 FAM213AQ9BRX8 229 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 TIPINQ9BVW5 301 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 CCSER1Q9C0I3 900 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 LHX5Q9H2C1 402 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 DPEP3Q9H4B8 488 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ASCL3Q9NQ33 180 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 STARD5Q9NSY2 213 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 DDX28Q9NUL7 540 aaKnown RBP2.44□□□□□ -2.02
XRN1-206ENST00000467077 ELOVL2Q9NXB9 296 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 GDAP2Q9NXN4 497 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 AKAP7Q9P0M2 348 aaPredicted RBP2.44□□□□□ -2.02
XRN1-206ENST00000467077 Q9UF83 564 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 TEKT2Q9UIF3 430 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 APPL1Q9UKG1 709 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 CDH9Q9ULB4 789 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 PLA2G4CQ9UP65 541 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 TDRKHQ9Y2W6 561 aaKnown RBP2.44□□□□□ -2.02
XRN1-206ENST00000467077 TEX264Q9Y6I9 313 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 LRBAP50851 2863 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ASXL3Q9C0F0 2248 aa2.44□□□□□ -2.02
XRN1-206ENST00000467077 ZNF106Q9H2Y7 1883 aaKnown RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 FER1L5A0AVI2 2057 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 DOPEY2Q9Y3R5 2298 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 SH3PXD2BA1X283 911 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ANKRD63C9JTQ0 380 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 TLR4O00206 839 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 LRRTM2O43300 516 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 RHBDL1O75783 438 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 TNFSF15O95150 251 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 OR6A2O95222 327 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 CTDNEP1O95476 244 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 TXNDC12O95881 172 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 IGHV4-34P06331 123 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 CT45A8P0DMV1 189 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 CT45A9P0DMV2 189 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 FERP16591 822 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 STIP1P31948 543 aaKnown RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 ATP5C1P36542 298 aaKnown RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 RIPPLY3P57055 190 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 KCNK10P57789 538 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 YBEYP58557 167 aaPredicted RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 RPS14P62263 151 aaKnown RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 HERV-K104P63124 156 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 GALK2Q01415 458 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 MSLNQ13421 630 aaPredicted RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 CRMP1Q14194 572 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 SLC17A1Q14916 467 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ABRAXAS2Q15018 415 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 KRT31Q15323 416 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 OR1C1Q15619 314 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 TTC31Q49AM3 519 aaPredicted RBP2.43□□□□□ -2.02
XRN1-206ENST00000467077 CT45A2Q5DJT8 189 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 PLBD1Q6P4A8 553 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 SLC39A4Q6P5W5 647 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 ZCCHC12Q6PEW1 402 aa2.43□□□□□ -2.02
XRN1-206ENST00000467077 GPBP1Q86WP2 473 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms