RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ZHX1-C8orf76Q96EF9 292 aa10.67□□□□□ -0.7
UBR4-210ENST00000466969 BOD1Q96IK1 185 aa10.67□□□□□ -0.7
UBR4-210ENST00000466969 FAIM2Q9BWQ8 316 aa10.67□□□□□ -0.7
UBR4-210ENST00000466969 CD244Q9BZW8 370 aa10.67□□□□□ -0.7
UBR4-210ENST00000466969 NPHS2Q9NP85 383 aa10.67□□□□□ -0.7
UBR4-210ENST00000466969 AHSPQ9NZD4 102 aa10.67□□□□□ -0.7
UBR4-210ENST00000466969 ADAM29Q9UKF5 820 aa10.67□□□□□ -0.7
UBR4-210ENST00000466969 ZNF346Q9UL40 294 aaKnown RBP10.67□□□□□ -0.7
UBR4-210ENST00000466969 IGHV1-69-2A0A0G2JMI3 117 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 A0A1W2PPW3 197 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 TRIM49D1C9J1S8 452 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 SULT2B1O00204 365 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 PPIAL4GP0DN37 164 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 UBASH3AP57075 661 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 TUBA1BP68363 451 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 TUBA4AP68366 448 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 CCL8P80075 99 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 LARS2Q15031 903 aaKnown RBP10.66□□□□□ -0.7
UBR4-210ENST00000466969 HFEQ30201 348 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 GLIPR1L2Q4G1C9 344 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 GLE1Q53GS7 698 aaKnown RBP10.66□□□□□ -0.7
UBR4-210ENST00000466969 BRD3OSQ6XYD6 125 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 TUBA1AQ71U36 451 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 ABHD12BQ7Z5M8 362 aaPredicted RBP10.66□□□□□ -0.7
UBR4-210ENST00000466969 C1orf174Q8IYL3 243 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 FAM169BQ8N8A8 192 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 C11orf44Q8N8P7 122 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 OR4C3Q8NH37 302 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 PIGXQ8TBF5 258 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 TRPC4APQ8TEL6 797 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 SERPINI1Q99574 410 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 NOX3Q9HBY0 568 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 PPANQ9NQ55 473 aaKnown RBP10.66□□□□□ -0.7
UBR4-210ENST00000466969 TFR2Q9UP52 801 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 NOX1Q9Y5S8 564 aa10.66□□□□□ -0.7
UBR4-210ENST00000466969 ARPC4-TTLL3A0A0A6YYG9 625 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 ZNF816-ZNF321PA0A0X1KG74 233 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 IGKV3-15P01624 115 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 CELA3BP08861 270 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 IGLL1P15814 213 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 SLC29A2Q14542 456 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 ZNF460Q14592 562 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 LIPJQ5W064 366 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 C3orf33Q6P1S2 294 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 TMPPEQ6ZT21 453 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 IL17RDQ8NFM7 739 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 ANKRD49Q8WVL7 239 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 CRLF2Q9HC73 371 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 OPTCQ9UBM4 332 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 SLC9A8Q9Y2E8 581 aa10.65□□□□□ -0.7
UBR4-210ENST00000466969 POLR3KQ9Y2Y1 108 aaPredicted RBP10.65□□□□□ -0.7
UBR4-210ENST00000466969 H0YIV9 168 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 NR5A2O00482 541 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 SCDO00767 359 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 TPD52L2O43399 206 aaKnown RBP10.64□□□□□ -0.71
UBR4-210ENST00000466969 SKAP2O75563 359 aaPredicted RBP10.64□□□□□ -0.71
UBR4-210ENST00000466969 KRT33AO76009 404 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 NGFRP08138 427 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 MLNP12872 115 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 CD33P20138 364 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 NR4A1P22736 598 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 MAGEA8P43361 318 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 SLC16A1P53985 500 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 PAX8Q06710 450 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 CPSF6Q16630 551 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBR4-210ENST00000466969 NKPD1Q17RQ9 610 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 GDPGP1Q6ZNW5 385 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 RNF144BQ7Z419 303 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 GALNT7Q86SF2 657 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 MYPOPQ86VE0 399 aaPredicted RBP10.64□□□□□ -0.71
UBR4-210ENST00000466969 FAM9CQ8IZT9 166 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 PDPRQ8NCN5 879 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 OR1K1Q8NGR3 316 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 UPRTQ96BW1 309 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
UBR4-210ENST00000466969 ZNF317Q96PQ6 595 aaPredicted RBP10.64□□□□□ -0.71
UBR4-210ENST00000466969 DIRC2Q96SL1 478 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 BPIFA3Q9BQP9 254 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 XAB2Q9HCS7 855 aaKnown RBP10.64□□□□□ -0.71
UBR4-210ENST00000466969 GIMAP4Q9NUV9 329 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 DUSP13Q9UII6 198 aa10.64□□□□□ -0.71
UBR4-210ENST00000466969 FRAS1Q86XX4 4008 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 K7EPI3 171 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 H6PDO95479 791 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 ESRRBO95718 433 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 IGKV1D-16P01601 117 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 PRKCAP17252 672 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 GABRA3P34903 492 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 MSX2P35548 267 aaPredicted RBP10.63□□□□□ -0.71
UBR4-210ENST00000466969 BPIFB3P59826 476 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 NPRL3Q12980 569 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 TRADDQ15628 312 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 MSMPQ1L6U9 139 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 PCGF3Q3KNV8 242 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 ALKBH6Q3KRA9 238 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 FRG2Q64ET8 278 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 DHRS7BQ6IAN0 325 aaPredicted RBP10.63□□□□□ -0.71
UBR4-210ENST00000466969 TMEM154Q6P9G4 183 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 LRP11Q86VZ4 500 aa10.63□□□□□ -0.71
UBR4-210ENST00000466969 POMGNT2Q8NAT1 580 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms