RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PRELID3BQ9Y3B1 194 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 A0A1W2PRU2 124 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 SDC3O75056 442 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 AIFM1O95831 613 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 THBS1P07996 1170 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 RAB40ALP0C0E4 278 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 F3P13726 295 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 IL9P15248 144 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ZNF136P52737 540 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ERVK-21P61565 698 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 PRKCZQ05513 592 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 UBXN2BQ14CS0 331 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ETFDHQ16134 617 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ZNF750Q32MQ0 723 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 SHEQ5VZ18 495 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 RPL22L1Q6P5R6 122 aaKnown RBP18.24■□□□□ 0.51
SDF4-205ENST00000465727 ZNF836Q6ZNA1 936 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 AMZ2Q86W34 360 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 OR4C6Q8NH72 309 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 RAB40AQ8WXH6 277 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ASB13Q8WXK3 278 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 GIMAP5Q96F15 307 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 TRMT61BQ9BVS5 477 aaKnown RBP18.24■□□□□ 0.51
SDF4-205ENST00000465727 SLC46A2Q9BY10 475 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 AICDAQ9GZX7 198 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ARL6Q9H0F7 186 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ENKD1Q9H0I2 346 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 TAS2R10Q9NYW0 307 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 OPN4Q9UHM6 478 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ATG4BQ9Y4P1 393 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 KLF2Q9Y5W3 355 aaPredicted RBP18.24■□□□□ 0.51
SDF4-205ENST00000465727 A0A1W2PPK0 400 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 UBE2QL1A1L167 161 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 LGALS8O00214 317 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ARPC5O15511 151 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 GLULP15104 373 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 MNDAP41218 407 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 RPS11P62280 158 aaKnown RBP eCLIP18.24■□□□□ 0.514e-6■■■□□ 16
SDF4-205ENST00000465727 SIRPAP78324 504 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 AGERQ15109 404 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 ZIC1Q15915 447 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 LINC00303Q3SY05 128 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 UNQ9370/PRO34162Q6UXP9 181 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 UBE2Q1Q7Z7E8 422 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 PM20D2Q8IYS1 436 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 STPG2Q8N412 459 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 RAB42Q8N4Z0 105 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 SLC25A38Q96DW6 304 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 SIPA1Q96FS4 1042 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 SLC35A4Q96G79 324 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 CLDND1Q9NY35 253 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 SIGLEC7Q9Y286 467 aa18.24■□□□□ 0.51
SDF4-205ENST00000465727 TBC1D3EA0A087X179 549 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 A0A1W2PQ45 241 aaPredicted RBP18.23■□□□□ 0.51
SDF4-205ENST00000465727 A0A1W2PQY0 241 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 IFITM5A6NNB3 132 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 ACOT7O00154 380 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 GPRIN2O60269 458 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 SELENOFO60613 162 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 ADRB1P08588 477 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 NOS3P29474 1203 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 VASPP50552 380 aaPredicted RBP18.23■□□□□ 0.51
SDF4-205ENST00000465727 GMFBP60983 142 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 DUSP8Q13202 625 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 SSX6Q7RTT6 188 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 CDH26Q8IXH8 852 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 ACOT4Q8N9L9 421 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 OR9A2Q8NGT5 310 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 S100A16Q96FQ6 103 aaKnown RBP18.23■□□□□ 0.51
SDF4-205ENST00000465727 DERL3Q96Q80 235 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 DNTTIP1Q9H147 329 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 WDR45Q9Y484 360 aa18.23■□□□□ 0.51
SDF4-205ENST00000465727 TBC1D3KA0A087X1G2 549 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 TBC1D3BA6NDS4 549 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 TBC1D3FA6NER0 549 aaPredicted RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 POM121CA8CG34 1229 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 MPTX1A8MV57 137 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 KPNA3O00505 521 aaPredicted RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 SPINT1O43278 529 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 ERI3O43414 337 aaKnown RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 OR2T7P0C7T2 308 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 C8orf89P0DMQ9 161 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 ANXA7P20073 488 aaKnown RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 DPP4P27487 766 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 TSFMP43897 325 aaKnown RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 EEF1A1P68104 462 aaKnown RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 TBC1D3GQ6DHY5 549 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 MCATQ8IVS2 390 aaKnown RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 SLC43A2Q8N370 569 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 DNAAF1Q8NEP3 725 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 OR2T27Q8NH04 317 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 NSMAFQ92636 917 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 MS4A6EQ96DS6 147 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 PELI1Q96FA3 418 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 OR14A2Q96R54 314 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 SPHK2Q9NRA0 654 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 C20orf141Q9NUB4 165 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 NTMQ9P121 344 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 KLK11Q9UBX7 282 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms