RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 GNPDA2Q8TDQ7 276 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 ACOT11Q8WXI4 607 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-215ENST00000465457 GTPBP3Q969Y2 492 aaKnown RBP12.62□□□□□ -0.39
HDAC6-215ENST00000465457 CRB3Q9BUF7 120 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 PRRG3Q9BZD7 231 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 NPDC1Q9NQX5 325 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-215ENST00000465457 MAN2C1Q9NTJ4 1040 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 CBLCQ9ULV8 474 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 CLCA3PQ9Y6N3 262 aa12.62□□□□□ -0.39
HDAC6-215ENST00000465457 MYOCOSA0A1B0GUC4 107 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 TRAPPC13A5PLN9 417 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 VSTM2BA6NLU5 285 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZAR1LA6NP61 321 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF701M0R085 212 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 PPICP45877 212 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 MVKQ03426 396 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 OCA2Q04671 838 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 RBPJQ06330 500 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 FOXD4Q12950 439 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 TUBA3CQ13748 450 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZBED5Q49AG3 693 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ENTPD8Q5MY95 495 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 MRPL2Q5T653 305 aaKnown RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF613Q6PF04 617 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 FIGNL1Q6PIW4 674 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 Q71RC1 249 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 OLIG3Q7RTU3 272 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF550Q7Z398 422 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 GPR141Q7Z602 305 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF440Q8IYI8 595 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 RNF113BQ8IZP6 322 aaKnown RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 CLIP4Q8N3C7 705 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 SVOPQ8N4V2 548 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF527Q8NB42 609 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 MORN4Q8NDC4 146 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 FAM81AQ8TBF8 368 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 PTPMT1Q8WUK0 201 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 TRUB1Q8WWH5 349 aaKnown RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 HAS2Q92819 552 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 SENP5Q96HI0 755 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF559Q9BR84 538 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 DLL4Q9NR61 685 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 PLCXD1Q9NUJ7 323 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 TNFRSF10DQ9UBN6 386 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 COPS7AQ9UBW8 275 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF835Q9Y2P0 537 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 GPR55Q9Y2T6 319 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-215ENST00000465457 CHST2Q9Y4C5 530 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 PCDHGB1Q9Y5G3 927 aa12.61□□□□□ -0.39
HDAC6-215ENST00000465457 GXYLT2A0PJZ3 443 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 SH3D21A4FU49 640 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 CPSF4LA6NMK7 179 aaKnown RBP12.6□□□□□ -0.39
HDAC6-215ENST00000465457 CRYABP02511 175 aaKnown RBP12.6□□□□□ -0.39
HDAC6-215ENST00000465457 IGFBP2P18065 325 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 DRD5P21918 477 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 ATP12AP54707 1039 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 CASP6P55212 293 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 CDH15P55291 814 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 SLC37A1P57057 533 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 HSF1Q00613 529 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 PTGES3Q15185 160 aaKnown RBP12.6□□□□□ -0.39
HDAC6-215ENST00000465457 SEC23BQ15437 767 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 SLX4IPQ5VYV7 408 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF730Q6ZMV8 503 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 ENTHD1Q8IYW4 607 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 C17orf47Q8NEP4 570 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 RHOXF1Q8NHV9 184 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 ZG16BQ96DA0 208 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 SLC41A3Q96GZ6 507 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 Q96MT0 163 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 NODALQ96S42 347 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 MDFIQ99750 246 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 TEX12Q9BXU0 123 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 ITPAQ9BY32 194 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 HES7Q9BYE0 225 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 TRIM2Q9C040 744 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 CXXC4Q9H2H0 198 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 PNO1Q9NRX1 252 aaKnown RBP12.6□□□□□ -0.39
HDAC6-215ENST00000465457 SLC35A3Q9Y2D2 325 aa12.6□□□□□ -0.39
HDAC6-215ENST00000465457 NPIPB9F8W1W9 429 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 ADAM10O14672 748 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 FAM20BO75063 409 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 CLPSP04118 112 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 IGKV3-11P04433 115 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 CT45A8P0DMV1 189 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 CT45A9P0DMV2 189 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 POU2F1P14859 743 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 ENDOUP21128 410 aaKnown RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 CHMP24386 653 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 FPR3P25089 353 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 KRT20P35900 424 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 IDH2P48735 452 aaKnown RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF136P52737 540 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 TSPAN31Q12999 210 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 FGFBP1Q14512 234 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 NSDHLQ15738 373 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms