RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 EXOSC6Q5RKV6 272 aaKnown RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 C9orf135Q5VTT2 229 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 ABLIM2Q6H8Q1 611 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 TMPPEQ6ZT21 453 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 SLC46A3Q7Z3Q1 461 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 MTDHQ86UE4 582 aaKnown RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 ANKS4BQ8N8V4 417 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 CCDC126Q96EE4 140 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 CCT7Q99832 543 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 THUMPD3Q9BV44 507 aaKnown RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 ACTRT3Q9BYD9 372 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 MYOZ1Q9NP98 299 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 INTS9Q9NV88 658 aaKnown RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 MALT1Q9UDY8 824 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 BAIAP2L1Q9UHR4 511 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 FAF1Q9UNN5 650 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 MOKQ9UQ07 419 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 AMDHD2Q9Y303 409 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 ZNF716A6NP11 495 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 SLC28A1O00337 649 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 TM9SF1O15321 606 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 ITGA5P08648 1049 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 UROSP10746 265 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 SDC1P18827 310 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 FOXG1P55316 489 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-224ENST00000464148 GUCY1A3Q02108 690 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 TP53BP2Q13625 1128 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 PDE7AQ13946 482 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 MST1LQ2TV78 715 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 SPDYE7PQ495Y7 208 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 SYT14P1Q58G82 188 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 CFAP157Q5JU67 520 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 C4orf33Q8N1A6 199 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 WDR31Q8NA23 367 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 OR52E4Q8NGH9 312 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 PIGXQ8TBF5 258 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 SLC25A43Q8WUT9 341 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-224ENST00000464148 TMEM234Q8WY98 164 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 ST8SIA1Q92185 356 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 DNAJA3Q96EY1 480 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 APOPT1Q96IL0 206 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 SOX7Q9BT81 388 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 BPESC1Q9GZL8 116 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 CCDC134Q9H6E4 229 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 KCNK9Q9NPC2 374 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 SIRT3Q9NTG7 399 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-224ENST00000464148 UPB1Q9UBR1 384 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 TMEFF2Q9UIK5 374 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-224ENST00000464148 CCL27Q9Y4X3 112 aa11.63□□□□□ -0.55
MRPL55-224ENST00000464148 HEATR1Q9H583 2144 aaKnown RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 LRP5LA4QPB2 252 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 NPIPB8E9PQR5 432 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 ETV2O00321 342 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 KRT16P08779 473 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 MYL2P10916 166 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 DDX5P17844 614 aaKnown RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 PRPH2P23942 346 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 NTF4P34130 210 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 SESN3P58005 492 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 PRPS1P60891 318 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 NAA20P61599 178 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 RPL38P63173 70 aaKnown RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 GNGT1P63211 74 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 TGFBR3Q03167 851 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 PDZK1Q5T2W1 519 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 CLEC6AQ6EIG7 209 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 BHLHB9Q6PI77 547 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 KLHL24Q6TFL4 600 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 CASP12Q6UXS9 341 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 FRMD7Q6ZUT3 714 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 R3HCC1LQ7Z5L2 792 aaKnown RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 C17orf78Q8N4C9 275 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 MTERF3Q96E29 417 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 KCNS3Q9BQ31 491 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 BHLHE41Q9C0J9 482 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 TNFRSF12AQ9NP84 129 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 SLC17A5Q9NRA2 495 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 PTGDR2Q9Y5Y4 395 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 SPIN1Q9Y657 262 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-224ENST00000464148 KCNE3Q9Y6H6 103 aa11.62□□□□□ -0.55
MRPL55-224ENST00000464148 SERINC4A6NH21 518 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 NPIPB9F8W1W9 429 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 SPAG7O75391 227 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 WNT11O96014 354 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 PGCP20142 388 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 APEX1P27695 318 aaKnown RBP11.61□□□□□ -0.55
MRPL55-224ENST00000464148 LSP1P33241 339 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 CRHR1P34998 444 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 SERPINF1P36955 418 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 HPCAL1P37235 193 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 MAGEA8P43361 318 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 ASMTP46597 345 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 CHN2P52757 468 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 WDR4P57081 412 aaKnown RBP11.61□□□□□ -0.55
MRPL55-224ENST00000464148 SLC25A3Q00325 362 aa11.61□□□□□ -0.55
MRPL55-224ENST00000464148 SKP2Q13309 424 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms