RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 APOBEC1P41238 236 aaKnown RBP15.16■□□□□ 0.02
HMGN1-210ENST00000464078 FAM166AQ6J272 317 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 EIF3MQ7L2H7 374 aaKnown RBP15.16■□□□□ 0.02
HMGN1-210ENST00000464078 BHLHE41Q9C0J9 482 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-210ENST00000464078 ZNF350Q9GZX5 532 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 C12orf65Q9H3J6 166 aaKnown RBP15.16■□□□□ 0.02
HMGN1-210ENST00000464078 SERHL2Q9H4I8 314 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 FKRPQ9H9S5 495 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 CHRNA9Q9UGM1 479 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 DCTN4Q9UJW0 460 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 HDGFL3Q9Y3E1 203 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 PMF1-BGLAPU3KQ54 211 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 A0A1W2PR80 420 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 ANKRD28O15084 1053 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 TRIM13O60858 407 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 MRPL33O75394 65 aaKnown RBP15.15■□□□□ 0.02
HMGN1-210ENST00000464078 GUSBP08236 651 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 FAM153BP0C7A2 387 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 PRPS1L1P21108 318 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 APOBEC3AP31941 199 aaPredicted RBP15.15■□□□□ 0.02
HMGN1-210ENST00000464078 CLK1P49759 484 aaKnown RBP15.15■□□□□ 0.02
HMGN1-210ENST00000464078 HBA1P69905 142 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 PHC1P78364 1004 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 H3F3AP84243 136 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 FAM153CQ494X1 144 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 AP1ARQ63HQ0 302 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 RIMKLAQ8IXN7 391 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 IFT20Q8IY31 132 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 ARIH2OSQ8N7S6 290 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 WDR31Q8NA23 367 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 OR5AK3PQ8NH89 298 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 PRPF18Q99633 342 aaKnown RBP15.15■□□□□ 0.02
HMGN1-210ENST00000464078 PPCSQ9HAB8 311 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 GIMAP2Q9UG22 337 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 KCNS2Q9ULS6 477 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 AMDHD2Q9Y303 409 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 TRAF6Q9Y4K3 522 aa15.15■□□□□ 0.02
HMGN1-210ENST00000464078 KIAA0513O60268 411 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 FCMRO60667 390 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 CYP7B1O75881 506 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 CHRNGP07510 517 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 UBTFL6P0CB48 400 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-210ENST00000464078 PGM1P36871 562 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 FOXG1P55316 489 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-210ENST00000464078 RPS26P62854 115 aaKnown RBP15.14■□□□□ 0.01
HMGN1-210ENST00000464078 GPR68Q15743 365 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 SWI5Q1ZZU3 235 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 ARHGAP11BQ3KRB8 267 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 FAM120AOSQ5T036 256 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 GRINAQ7Z429 371 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 KRTCAP2Q8N6L1 136 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 ARL5BQ96KC2 179 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 SLC17A5Q9NRA2 495 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 SLC35A3Q9Y2D2 325 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 SLC9A8Q9Y2E8 581 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 FKBP7Q9Y680 259 aa15.14■□□□□ 0.01
HMGN1-210ENST00000464078 SLC35F4A4IF30 521 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 HAX1O00165 279 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 NPHS1O60500 1241 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 LY6HO94772 140 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 TFPIP10646 304 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 KRT4P19013 534 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 HNF1AP20823 631 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 NR4A2P43354 598 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 PDLIM4P50479 330 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 SLC25A3Q00325 362 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 TGFBR3Q03167 851 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 ATP6AP1LQ52LC2 224 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 C6orf136Q5SQH8 315 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 MIPOL1Q8TD10 442 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 MSI2Q96DH6 328 aaKnown RBP15.13■□□□□ 0.01
HMGN1-210ENST00000464078 PIMREGQ9BSJ6 248 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 C1orf50Q9BV19 199 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 DUSP26Q9BV47 211 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 PRR14Q9BWN1 585 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 MYOZ1Q9NP98 299 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-210ENST00000464078 EXOSC3Q9NQT5 275 aaKnown RBP15.13■□□□□ 0.01
HMGN1-210ENST00000464078 CTPS2Q9NRF8 586 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 POLE3Q9NRF9 147 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 MKS1Q9NXB0 559 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 MKLN1Q9UL63 735 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 TRAPPC4Q9Y296 219 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 ATP23Q9Y6H3 246 aa15.13■□□□□ 0.01
HMGN1-210ENST00000464078 LOC100289279A0A1B0GTE1 492 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 ATP6V1G2-DDX39BF2Z307 99 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 CFLARO15519 480 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 PEX11AO75192 247 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 SOAT1P35610 550 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 MAGEA8P43361 318 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 MAPK14Q16539 360 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 MST1LQ2TV78 715 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 CASP12Q6UXS9 341 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 C16orf62Q7Z3J2 963 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 C6orf120Q7Z4R8 191 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 OR52E4Q8NGH9 312 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 BOD1Q96IK1 185 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 OR11A1Q9GZK7 315 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 CHODLQ9H9P2 273 aa15.12■□□□□ 0.01
HMGN1-210ENST00000464078 EML4Q9HC35 981 aaKnown RBP15.12■□□□□ 0.01
HMGN1-210ENST00000464078 EXD2Q9NVH0 621 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms