RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GALNT5Q7Z7M9 940 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 ADGRG3Q86Y34 549 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 WFDC8Q8IUA0 241 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 ANKFN1Q8N957 763 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 ANKRD42Q8N9B4 389 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
BRCA1-207ENST00000461798 HPS1Q92902 700 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 TLCD1Q96CP7 247 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 PLPPR2Q96GM1 343 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 OR5B2Q96R09 309 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 OR52E6Q96RD3 313 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 PANX1Q96RD7 426 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 CCL19Q99731 98 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 INPP5KQ9BT40 448 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 SLC38A1Q9H2H9 487 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 MANSC1Q9H8J5 431 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 NGBQ9NPG2 151 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 CHRNA9Q9UGM1 479 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 TRAPPC4Q9Y296 219 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 HDGFL3Q9Y3E1 203 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 NIPBLQ6KC79 2804 aaeCLIP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 IGHV3-15A0A0B4J1V0 119 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF716A6NP11 495 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 HS3ST1O14792 307 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 KLF11O14901 512 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF208O43345 1280 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ADAM11O75078 769 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 SLC22A3O75751 556 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 KRT75O95678 551 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 PMS2P2O95744 297 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 PLAUP00749 431 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 CHRM4P08173 479 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 COX5AP20674 150 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 RPS4Y1P22090 263 aaKnown RBP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 IL32P24001 234 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 CDKN2CP42773 168 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 MVDP53602 400 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 SLC16A1P53985 500 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 NME5P56597 212 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 H3F3AP84243 136 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 MAPK11Q15759 364 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 SYPL1Q16563 259 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 GSTA3Q16772 222 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 GPAT3Q53EU6 434 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 BEND6Q5SZJ8 279 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 NCMAPQ5T1S8 102 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ABLIM2Q6H8Q1 611 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 SEZ6L2Q6UXD5 910 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF621Q6ZSS3 439 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 MSANTD1Q6ZTZ1 278 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 BHLHA15Q7RTS1 189 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 P2RY8Q86VZ1 359 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ARFGAP2Q8N6H7 521 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 LILRB1Q8NHL6 650 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF563Q8TA94 476 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 KISS1RQ969F8 398 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 COX4I2Q96KJ9 171 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ZBTB18Q99592 522 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 POTEKPQ9BYX7 375 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ADAM19Q9H013 955 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 TMBIM4Q9HC24 238 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 CTPS2Q9NRF8 586 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 SDR39U1Q9NRG7 319 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-207ENST00000461798 ZIM2Q9NZV7 527 aa8.11□□□□□ -1.11
BRCA1-207ENST00000461798 HEATR5AQ86XA9 2040 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 PRR14LQ5THK1 2151 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 NAV3Q8IVL0 2385 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 RAI1Q7Z5J4 1906 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 GOLGA8QA0A0J9YX86 632 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 GOLGA8OA6NCC3 632 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 CLDN24A6NM45 220 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 FAM171A2A8MVW0 826 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 GOLGA8NF8WBI6 632 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 OVOL3O00110 214 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 RFXANKO14593 260 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 GPR171O14626 319 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 GSNP06396 782 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 DBIP07108 87 aaKnown RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 FESP07332 822 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 TFPTP0C1Z6 253 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 TFPIP10646 304 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 EDNRAP25101 427 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 RYKP34925 604 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 SLC1A3P43003 542 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 IDH2P48735 452 aaKnown RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 PTH2RP49190 550 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 MRPL19P49406 292 aaKnown RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 MAGOHP61326 146 aaKnown RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 HPCAP84074 193 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 GNA13Q14344 377 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 TSC22D1Q15714 1073 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 ZSWIM7Q19AV6 140 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 COX20Q5RI15 118 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 TIMM23BQ5SRD1 257 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 MAVSQ7Z434 540 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 YTHDF3Q7Z739 585 aaKnown RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF440Q8IYI8 595 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 TMEM171Q8WVE6 324 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 ZBTB9Q96C00 473 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms